Detailed information NTG0483519

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IC785_RS11525
• Genome accession: NZ_CP061603
• Coordinates: 2356149..2356964 (-)
• Length: 271 a.a.
• NCBI ID: WP_077168510.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain AS53
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2351149..2361964

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC785_RS11495 (IC785_11495)	-	2351461..2351901 (-)	441	WP_107973453.1	SRPBCC family protein	-
IC785_RS11500 (IC785_11500)	tadA	2351971..2352474 (-)	504	WP_031944487.1	tRNA adenosine(34) deaminase TadA	-
IC785_RS11505 (IC785_11505)	-	2352482..2353606 (-)	1125	WP_019458997.1	enoyl-CoA hydratase/isomerase family protein	-
IC785_RS11510 (IC785_11510)	ung	2353603..2354316 (-)	714	WP_077168513.1	uracil-DNA glycosylase	-
IC785_RS11515 (IC785_11515)	-	2354367..2354963 (-)	597	WP_077168512.1	6-pyruvoyl trahydropterin synthase family protein	-
IC785_RS11520 (IC785_11520)	gspK	2355193..2356149 (-)	957	WP_077168511.1	type II secretion system minor pseudopilin GspK	-
IC785_RS11525 (IC785_11525)	xcpW	2356149..2356964 (-)	816	WP_077168510.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IC785_RS11530 (IC785_11530)	xcpV	2356964..2357344 (-)	381	WP_019458993.1	type II secretion system minor pseudopilin GspI	Machinery gene
IC785_RS11535 (IC785_11535)	-	2357334..2357885 (-)	552	WP_004701984.1	type II secretion system protein	-
IC785_RS11540 (IC785_11540)	-	2357895..2358503 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IC785_RS11545 (IC785_11545)	-	2358541..2359314 (-)	774	WP_077168509.1	TatD family hydrolase	-
IC785_RS11550 (IC785_11550)	-	2359332..2359673 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
IC785_RS11555 (IC785_11555)	-	2359686..2360666 (-)	981	WP_077168508.1	DNA polymerase III subunit delta'	-
IC785_RS11560 (IC785_11560)	kdsB	2360678..2361439 (-)	762	WP_190980250.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30658.14 Da
• Isoelectric Point: 9.8524

>NTDB_id=483519 IC785_RS11525 WP_077168510.1 2356149..2356964(-) (xcpW) [Acinetobacter seifertii strain AS53]
MIKNKYFHYRSTAAHLAARSGVVSTGYSEHSSSFCAQTKCSFKDPHTRNMVSRLAARSSSVRLTRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAVHEVHLFELQDAYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDAEQKKLYRLKYTNLNTSNREQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQLTVAGVSYEWIYSLNQGNLALSQQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=483519 IC785_RS11525 WP_077168510.1 2356149..2356964(-) (xcpW) [Acinetobacter seifertii strain AS53]
ATGATAAAAAATAAATATTTTCACTATCGTAGCACAGCTGCGCATCTTGCGGCACGATCAGGAGTTGTGTCGACTGGCTA
TTCAGAGCATAGCTCTTCGTTTTGCGCTCAGACAAAGTGTAGCTTTAAAGACCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCGAGCAGTGTTCGATTAACTCGCGCCTCAGGATTTACGTTGGTTGAGTTGTTGGTTGCTATAGCTATC
TTTGCGGTTTTATCTTTATTAGGGTGGAAAATTTTCGATTATCTACTCAAGGTTCGTGATCGCAACGCTGTACATGAAGT
GCATTTATTTGAGTTACAAGACGCTTATCAACAAATCCTTCGTGATACTTTGCAAATTATTCCTCTATCGGCAAATCAGG
GTGGACAACTTCATCCAGCTTTAGAAATCGATAATCAAATTTTGCGTTTTAGCAAAGCAGGGGTAACTGATCCTTTAAAA
CAAGGGCTCTCACCGTTTGAACGAATTGAGTATCGTTATGATGCGGAACAAAAAAAACTATATCGTCTTAAATATACCAA
TTTAAATACTTCGAATAGGGAGCAGCCTTTATCGAGTACCTTGTTAAGTCAAGTTGATCAATACCAAATTATGGTTTTGA
CTCCGCAAGAGGTAACAAAATGGCCCGAGGTTAATATTGATCCAACAAAGCCTAACGAGTTAAAAAAATTACCGAAAGGA
ATAAAAATCCAACTTACAGTAGCGGGAGTAAGTTATGAATGGATCTATAGCTTAAATCAAGGCAACTTGGCCCTTTCTCA
GCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	94.69	83.395	0.79