Detailed information NTG0482830

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: J7U23_RS09745
• Genome accession: NZ_CP072435
• Coordinates: 1882115..1883215 (+)
• Length: 366 a.a.
• NCBI ID: WP_002947786.1
• Uniprot ID: Q5LXI7
• Organism: Streptococcus thermophilus strain S24736
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1877115..1888215

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7U23_RS09720 (J7U23_09645)	pgsA	1877657..1878199 (-)	543	WP_372589918.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
J7U23_RS09725 (J7U23_09650)	-	1878212..1879069 (-)	858	WP_002947779.1	helix-turn-helix transcriptional regulator	-
J7U23_RS09730 (J7U23_09655)	yfmH	1879128..1880404 (-)	1277	Protein_1859	EF-P 5-aminopentanol modification-associated protein YfmH	-
J7U23_RS09735 (J7U23_09660)	yfmF	1880406..1881657 (-)	1252	Protein_1860	EF-P 5-aminopentanol modification-associated protein YfmF	-
J7U23_RS09740 (J7U23_09665)	yaaA	1881735..1882112 (+)	378	WP_002947785.1	S4 domain-containing protein YaaA	-
J7U23_RS09745 (J7U23_09670)	recF	1882115..1883215 (+)	1101	WP_002947786.1	DNA replication/repair protein RecF	Machinery gene
J7U23_RS09750 (J7U23_09675)	guaB	1883384..1884865 (-)	1482	WP_011227627.1	IMP dehydrogenase	-
J7U23_RS09755 (J7U23_09680)	trpS	1885042..1886064 (-)	1023	WP_002952292.1	tryptophan--tRNA ligase	-
J7U23_RS09760 (J7U23_09685)	-	1886491..1887363 (+)	873	WP_064355694.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42173.29 Da
• Isoelectric Point: 8.3913

>NTDB_id=482830 J7U23_RS09745 WP_002947786.1 1882115..1883215(+) (recF) [Streptococcus thermophilus strain S24736]
MWLEKIDIQHFRNYSEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTHLDKELIQFQQNSLKLNGIVHRHSGN
LPLEINLSNKGRVTKVNYLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSNYNHVLKQR
NAYLKSTDKVDINFLSVLDEQLADFGARVIKHRLEFIKQLEEEADGHHSILSNQIERLKISYESNIPIQNSKDIREAFLT
TLNQNHKRDIFKKNTGVGPHRDDLKFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTEEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPNLKTFLVKNGTIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=482830 J7U23_RS09745 WP_002947786.1 1882115..1883215(+) (recF) [Streptococcus thermophilus strain S24736]
ATGTGGCTTGAAAAAATTGATATTCAACACTTTAGAAATTATTCTGAAGCCTCTGTGAGCTTTTCACCACATCTCAATAT
TTTTCTTGGACGAAATGCCCAAGGAAAAACAAATATTCTTGAAGCTATCTATTTTCTAGCCTTAACACGTAGTCATCGGA
CCCATTTAGACAAGGAACTAATTCAGTTCCAGCAAAATAGTCTTAAACTAAACGGCATCGTGCATCGTCATAGTGGAAAC
CTACCTCTGGAAATCAACTTATCTAATAAGGGACGAGTTACAAAGGTCAACTACCTCAAGCAGGCAAAATTATCTGATTA
TATAGGTCACATGACGGTGGTACTCTTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGTCTAAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTACCTCTCAGACCTATCAAATTACAATCATGTTCTTAAGCAGCGT
AATGCCTATCTCAAATCTACTGACAAGGTAGACATTAATTTCCTCTCAGTTTTAGATGAACAGCTTGCCGATTTTGGAGC
ACGAGTTATTAAACATAGACTAGAATTTATCAAGCAATTAGAAGAGGAAGCTGATGGACATCATAGTATTCTCTCAAATC
AGATTGAGCGTCTTAAAATTTCCTATGAATCTAACATCCCAATACAAAATAGCAAAGATATTCGAGAAGCATTTTTAACT
ACATTAAACCAGAATCACAAAAGAGATATCTTCAAAAAGAATACCGGTGTTGGTCCACATAGGGATGATTTAAAATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAAGGGCAGCAACGTAGCCTTATTCTTTCATTAAAAATGGCTGAGATTG
CTCTAATTAAAAAAGTGACAGAGGAATTTCCTATTCTTCTCCTTGACGATGTCATGAGTGAACTTGACAATCACCGTCAA
CTTAAATTGCTAGAAAGTATTGATGAAGAGGTCCAAACTTTCATGACTACAACCTCACTCGATCATCTTAGCAACCTACC
ACCCAATTTAAAGACCTTCTTAGTTAAGAATGGTACTATTTATGAAAAGCAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q5LXI7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.642	97.814	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	42.935	100	0.432