Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   J7U00_RS04635 Genome accession   NZ_CP072431
Coordinates   882801..883283 (+) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus strain S24745     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 877801..888283
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7U00_RS04615 (J7U00_04610) queG 878674..879792 (+) 1119 WP_138496688.1 tRNA epoxyqueuosine(34) reductase QueG -
  J7U00_RS04620 (J7U00_04615) prfB 879845..880943 (+) 1099 WP_116920253.1 peptide chain release factor 2 -
  J7U00_RS04625 (J7U00_04620) ftsE 881031..881723 (+) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  J7U00_RS04630 (J7U00_04625) ftsX 881716..882645 (+) 930 WP_011681194.1 permease-like cell division protein FtsX -
  J7U00_RS04635 (J7U00_04630) mutX 882801..883283 (+) 483 WP_011226072.1 8-oxo-dGTP diphosphatase Machinery gene
  J7U00_RS04640 (J7U00_04635) - 883294..884472 (+) 1179 WP_138496689.1 AI-2E family transporter -
  J7U00_RS04645 (J7U00_04640) - 884462..885691 (+) 1230 WP_207559921.1 lipopolysaccharide assembly protein LapB -
  J7U00_RS04650 (J7U00_04645) lepB 885814..886371 (+) 558 WP_011681191.1 signal peptidase I -
  J7U00_RS04655 (J7U00_04650) pepT 886579..887802 (+) 1224 WP_014608366.1 peptidase T -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=482485 J7U00_RS04635 WP_011226072.1 882801..883283(+) (mutX) [Streptococcus thermophilus strain S24745]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=482485 J7U00_RS04635 WP_011226072.1 882801..883283(+) (mutX) [Streptococcus thermophilus strain S24745]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTCTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTTGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706