Detailed information NTG0479779

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: IBB94_RS07955
• Genome accession: NZ_CP061024
• Coordinates: 1547024..1549177 (-)
• Length: 717 a.a.
• NCBI ID: WP_207559839.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain 13498
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 1542024..1554177

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IBB94_RS07920 (IBB94_07930)	-	1542139..1542369 (-)	231	WP_014608662.1	bacteriocin class II family protein	-
IBB94_RS07925 (IBB94_07935)	-	1542725..1542925 (-)	201	WP_011681569.1	hypothetical protein	-
IBB94_RS07930 (IBB94_07940)	-	1542944..1543120 (-)	177	WP_011681570.1	Blp family class II bacteriocin	-
IBB94_RS07935 (IBB94_07945)	-	1543376..1544107 (+)	732	WP_207559838.1	response regulator transcription factor	-
IBB94_RS10115	-	1544644..1545447 (+)	804	WP_240892566.1	ATP-binding protein	-
IBB94_RS07945 (IBB94_07955)	-	1545465..1545626 (-)	162	WP_011226496.1	ComC/BlpC family leader-containing pheromone/bacteriocin	-
IBB94_RS07950 (IBB94_07960)	-	1545641..1547008 (-)	1368	WP_084829837.1	bacteriocin secretion accessory protein	-
IBB94_RS07955 (IBB94_07965)	comA/nlmT	1547024..1549177 (-)	2154	WP_207559839.1	peptide cleavage/export ABC transporter	Regulator
IBB94_RS07960 (IBB94_07970)	-	1550191..1551936 (-)	1746	WP_207559840.1	ABC transporter ATP-binding protein	-
IBB94_RS07965 (IBB94_07975)	-	1551929..1553686 (-)	1758	WP_207559841.1	ABC transporter transmembrane domain-containing protein	-
IBB94_RS10120	-	1553874..1554080 (-)	207	WP_002948879.1	hypothetical protein	-

Sequence

Protein

• Length: 717 a.a.
• Molecular weight: 80627.45 Da
• Isoelectric Point: 6.8332

>NTDB_id=479779 IBB94_RS07955 WP_207559839.1 1547024..1549177(-) (comA/nlmT) [Streptococcus thermophilus strain 13498]
MFRFRRTFVPQIDMRDCGVAALASVAKYYGSDYSLAHLRELAKTNKEGTTALGLIEAAKKIGFETRAIKAEMSLFEMEDV
PYPFIAHVNKDGKLQHYYVIYKSTKDYPIIGDPDPSVKVTKMTKERFEKEWTGVTLFMGPEPSYKPHKDKKNGLWDFLPL
IFKQRSLIANIVFASLLVTLINILGSYYLQGILDEYVPNQMKSTLGIISIGLVVTYVLQQMMTFARDYLLTILSQRLTID
VILSYIRHIFELPMSFFATRRTGEVISRFSDANSIIDALASTILSLFLDFSIVIIVGGVLLIQNSNLFKLVLCSVPIYTL
IVFAFMKPFERMNHDVMQSNAMVNSAIIEDINGIETIKSLTSEEVCYQKIDGEFVDYLDNSFRLSKLSILQTSLKQGAQL
ILNVLILWTGAQLVMGNTISIGQLITFNMLLSYFTNPLENIINLQTKLQSAKVANTRLNEVYLIESEFGQSDDTYQEGIA
DGDITVTDLSYKYGFGRDTLTDVSLTIRQGEKISFVGVSGSGKTTLAKMLVNFYQPYKGHIDFNGQNISRIDKKTLRQHI
NYLPQQSYIFSGSVLENLTLGAARGITQADILKACEIAEIRQDIENMPMGFQTELSDGAGLSGGQKQRIALARALLTKSP
VLILDEATSGLDVLTEKQVIDNLLALKDKTIIFVAHRLSIAERTDRIVVIDQGRVVETVSHQDLMSYPGFYYQLFRK

Nucleotide

• Length: 2154 bp

>NTDB_id=479779 IBB94_RS07955 WP_207559839.1 1547024..1549177(-) (comA/nlmT) [Streptococcus thermophilus strain 13498]
ATGTTTCGTTTTCGTAGGACTTTTGTCCCTCAAATAGACATGAGGGATTGTGGAGTTGCTGCCTTGGCATCAGTGGCCAA
GTACTATGGTTCAGATTATTCATTAGCACATCTGCGTGAGTTGGCGAAGACCAATAAAGAAGGGACAACTGCCTTAGGTC
TTATAGAGGCTGCTAAAAAAATTGGCTTTGAAACGAGAGCTATAAAGGCTGAAATGTCGCTCTTTGAGATGGAAGATGTT
CCTTATCCTTTTATTGCTCATGTTAATAAAGATGGGAAGCTTCAACATTATTATGTTATTTATAAAAGCACCAAGGATTA
TCCGATAATTGGAGACCCTGATCCAAGTGTAAAAGTAACTAAAATGACTAAAGAGCGTTTTGAGAAAGAGTGGACAGGTG
TTACTCTTTTTATGGGACCGGAACCCAGTTATAAACCACATAAGGATAAGAAAAATGGACTCTGGGACTTTCTCCCTTTG
ATCTTTAAACAAAGGTCCTTGATAGCTAATATTGTCTTTGCCAGTCTCTTGGTTACTTTAATAAATATTTTAGGTTCCTA
TTATTTACAAGGTATTCTAGACGAATATGTCCCTAATCAAATGAAGTCTACCTTAGGAATTATCTCAATTGGATTAGTTG
TGACCTATGTTTTACAACAAATGATGACTTTTGCAAGAGATTATCTCTTAACCATACTGAGTCAGCGATTGACCATTGAC
GTTATCTTGTCCTACATACGACATATCTTTGAACTCCCAATGTCTTTTTTTGCCACAAGACGTACAGGGGAGGTTATCTC
ACGTTTTAGTGATGCTAACTCTATTATCGATGCTCTGGCTTCGACGATATTATCACTTTTCCTTGATTTCTCTATTGTGA
TTATCGTAGGAGGCGTGTTATTGATACAAAATAGCAATCTCTTCAAGCTAGTTCTTTGTTCGGTTCCAATTTATACCCTT
ATCGTCTTTGCCTTTATGAAACCTTTTGAGCGAATGAATCATGACGTCATGCAGAGTAATGCTATGGTTAATTCAGCCAT
CATTGAGGACATTAATGGGATTGAAACCATAAAGTCACTAACCAGCGAAGAAGTATGCTATCAAAAGATTGATGGTGAGT
TTGTTGACTATCTAGACAATTCTTTTCGCCTTTCTAAGTTATCTATACTACAAACATCATTGAAACAAGGTGCTCAACTT
ATTTTAAATGTACTTATCCTCTGGACAGGTGCTCAGTTGGTGATGGGAAATACCATTTCGATAGGACAATTGATTACTTT
TAATATGTTGCTTTCTTACTTCACGAATCCTTTGGAAAATATCATTAACCTGCAAACCAAGTTACAGTCTGCTAAGGTAG
CTAATACTAGGCTCAATGAGGTCTATCTGATTGAATCAGAGTTTGGACAAAGTGATGATACCTATCAAGAAGGCATTGCG
GATGGAGATATCACTGTTACGGATTTATCTTATAAATATGGTTTTGGTCGTGATACTTTGACTGATGTCAGTTTGACGAT
TAGACAAGGAGAAAAAATCAGTTTTGTTGGTGTCAGTGGATCTGGTAAGACTACTCTAGCTAAAATGTTGGTCAATTTTT
ATCAACCATATAAGGGGCACATAGATTTTAATGGTCAAAATATTAGTCGCATAGACAAGAAAACTCTTCGTCAACATATT
AACTATCTCCCTCAGCAATCCTATATATTTAGTGGTAGTGTTTTAGAAAATCTTACTTTAGGTGCAGCACGGGGTATTAC
GCAAGCTGATATTTTGAAAGCTTGTGAAATAGCAGAAATTCGTCAAGATATTGAAAACATGCCTATGGGGTTTCAGACAG
AGCTGTCTGATGGAGCAGGTCTGTCTGGAGGGCAAAAGCAACGTATCGCTTTGGCGCGTGCACTACTAACGAAATCTCCT
GTACTAATCTTAGATGAAGCAACTAGCGGATTGGATGTTTTGACAGAAAAGCAGGTTATTGATAACCTCCTAGCACTAAA
AGATAAAACGATCATCTTTGTAGCACACAGGCTTAGTATCGCTGAGCGGACCGACCGTATCGTAGTCATTGATCAGGGAC
GCGTAGTGGAGACAGTTTCTCATCAAGACCTAATGTCTTATCCAGGTTTCTATTATCAATTATTTAGAAAGTGA

Domains

Predicted by InterproScan.

• Peptidase C39 family (Peptidase_C39) (7-142)

• ABC transporter transmembrane region (ABC_membrane) (170-438)

• ABC transporter (ABC_tran) (500-649)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	67.787	99.582	0.675
comA	Streptococcus mitis NCTC 12261	66.245	99.163	0.657
comA	Streptococcus pneumoniae Rx1	65.823	99.163	0.653
comA	Streptococcus pneumoniae D39	65.823	99.163	0.653
comA	Streptococcus pneumoniae R6	65.823	99.163	0.653
comA	Streptococcus mitis SK321	65.541	99.163	0.65
comA	Streptococcus pneumoniae TIGR4	65.401	99.163	0.649
comA	Streptococcus gordonii str. Challis substr. CH1	64.146	99.582	0.639