Detailed information NTG0479039

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: JZ789_RS11785
• Genome accession: NZ_CP071806
• Coordinates: 2374282..2375376 (+)
• Length: 364 a.a.
• NCBI ID: WP_012028050.1
• Uniprot ID: A0A0H3N2H6
• Organism: Streptococcus suis strain GX69
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2369282..2380376

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JZ789_RS11760 (JZ789_11670)	pgsA	2369801..2370340 (-)	540	WP_014736596.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
JZ789_RS11765 (JZ789_11675)	rodZ	2370350..2371207 (-)	858	WP_024394581.1	cytoskeleton protein RodZ	-
JZ789_RS11770 (JZ789_11680)	yfmH	2371289..2372572 (-)	1284	WP_024394582.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
JZ789_RS11775 (JZ789_11685)	yfmF	2372569..2373822 (-)	1254	WP_009911054.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
JZ789_RS11780 (JZ789_11690)	yaaA	2373896..2374279 (+)	384	WP_024394583.1	S4 domain-containing protein YaaA	-
JZ789_RS11785 (JZ789_11695)	recF	2374282..2375376 (+)	1095	WP_012028050.1	DNA replication/repair protein RecF	Machinery gene
JZ789_RS11790 (JZ789_11700)	guaB	2375648..2377129 (-)	1482	WP_014637236.1	IMP dehydrogenase	-
JZ789_RS11795 (JZ789_11705)	trpS	2377361..2378386 (-)	1026	WP_013730696.1	tryptophan--tRNA ligase	-
JZ789_RS11800 (JZ789_11710)	-	2378741..2379613 (+)	873	WP_013730698.1	YitT family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42188.24 Da
• Isoelectric Point: 6.9173

>NTDB_id=479039 JZ789_RS11785 WP_012028050.1 2374282..2375376(+) (recF) [Streptococcus suis strain GX69]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREELTIEYQTSIELTDDVNLIDKFLT
ELEKSRKRDLFKKNTGVGPHRDDVAFFINGMNAHYASQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDSLKIFHIESGKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=479039 JZ789_RS11785 WP_012028050.1 2374282..2375376(+) (recF) [Streptococcus suis strain GX69]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTACTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCCCTTGACATTCACTTGACAGACAAGGGACGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCCAACTA
TATCGGCCACATGAATGTTGTTCTCTTCGCCCCTGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TCATCGATGTCGAGCTCGGGCAAATCAAGCCACTCTATCTCTCTGACCTATCGAATTATAACCACGTTTTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCTGTGTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTGACTTTCTAAAGAAATTAGAGGAATTCGGAAATAGAAAAGTTCAAGAAATATCTGGCA
ATCGGGAAGAATTGACAATCGAATACCAGACCTCAATCGAATTGACAGATGATGTCAATTTAATTGACAAATTCTTGACG
GAACTAGAAAAGTCTCGTAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATGTAGCTTTCTT
TATAAATGGAATGAATGCCCATTATGCTAGCCAAGGTCAGCACCGCAGTCTCGTTCTGTCACTCAAACTAGCTGAAATTG
AGCTGATGAAAGAAGTCACACGAGAGTACCCAATTCTACTCTTAGATGATGTTATGAGTGAGCTGGATAATAATCGTCAA
ATCAAACTATTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAGTTTAAAAATCTTCCATATTGAGTCTGGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: A0A0H3N2H6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	70.36	99.176	0.698
recF	Bacillus subtilis subsp. subtilis str. 168	43.514	100	0.442