Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HP15_RS17395 Genome accession   NC_017506
Coordinates   3696075..3696467 (+) Length   130 a.a.
NCBI ID   WP_008175635.1    Uniprot ID   G6YWX8
Organism   Marinobacter adhaerens HP15     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3691075..3701467
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HP15_RS17365 (HP15_3507) - 3691373..3692386 (-) 1014 WP_008175649.1 aspartate carbamoyltransferase catalytic subunit -
  HP15_RS17370 (HP15_3508) pyrR 3692414..3692923 (-) 510 WP_008175647.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HP15_RS17375 (HP15_3509) ruvX 3692931..3693353 (-) 423 WP_008175643.1 Holliday junction resolvase RuvX -
  HP15_RS17380 (HP15_3510) - 3693346..3693912 (-) 567 WP_039882120.1 YqgE/AlgH family protein -
  HP15_RS17385 (HP15_3511) - 3693909..3694775 (-) 867 WP_014578671.1 energy transducer TonB -
  HP15_RS17390 (HP15_3512) gshB 3694824..3695777 (-) 954 WP_014578672.1 glutathione synthase -
  HP15_RS17395 (HP15_3513) pilG 3696075..3696467 (+) 393 WP_008175635.1 twitching motility response regulator PilG Regulator
  HP15_RS17400 (HP15_3514) pilH 3696500..3696862 (+) 363 WP_011787171.1 twitching motility response regulator PilH -
  HP15_RS17405 (HP15_3515) - 3696883..3697428 (+) 546 WP_008172777.1 chemotaxis protein CheW -
  HP15_RS17410 (HP15_3516) - 3697520..3699595 (+) 2076 WP_041645743.1 methyl-accepting chemotaxis protein -
  HP15_RS17415 (HP15_3517) - 3699623..3700522 (+) 900 WP_014578674.1 protein-glutamate O-methyltransferase CheR -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14595.86 Da        Isoelectric Point: 5.2241

>NTDB_id=47838 HP15_RS17395 WP_008175635.1 3696075..3696467(+) (pilG) [Marinobacter adhaerens HP15]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADSQPDIIFVDIMMPRLDGYQTCALIKNNSSFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRQYVPQAEQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=47838 HP15_RS17395 WP_008175635.1 3696075..3696467(+) (pilG) [Marinobacter adhaerens HP15]
ATGGATGACAACTTCGAGAACTTGAAGATCATGGTGATCGACGACAGTAAAACCATACGTCGCACCGCAGAAACCCTTCT
GAAAAAGGTCGGCTGTGAGGTCATCACCGCGACTGACGGCTTTGACGCTCTTGCCAAGATTGCCGATTCACAGCCGGACA
TCATTTTTGTCGATATCATGATGCCCCGCCTGGACGGCTACCAGACCTGCGCACTTATCAAGAACAATTCCTCCTTCAAA
AAGACGCCGGTTATCATGCTCTCCAGCAAGGACGGTCTGTTCGACAAGGCCAAGGGCCGTATCGTCGGCTCGGACCAGTA
TCTGACCAAACCGTTCAGTAAGGATGAGCTGCTTAATACCATCCGCCAGTATGTTCCACAGGCGGAACAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G6YWX8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.4

96.154

0.754
  vicR Streptococcus mutans UA159

41.803

93.846

0.392
  micA Streptococcus pneumoniae Cp1015

44.037

83.846

0.369
  pilH Synechocystis sp. PCC 6803

40.517

89.231

0.362

Multiple sequence alignment