Detailed information NTG0478165

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: J3Q14_RS05535
• Genome accession: NZ_CP071587
• Coordinates: 1085180..1086139 (+)
• Length: 319 a.a.
• NCBI ID: WP_002856368.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain RM1477
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1080180..1091139

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J3Q14_RS05510 (J3Q14_05510)	neuB	1080679..1081719 (+)	1041	WP_002870496.1	N-acetylneuraminate synthase	-
J3Q14_RS05515 (J3Q14_05515)	neuC	1081716..1082834 (+)	1119	WP_002911676.1	UDP-N-acetylglucosamine 2-epimerase	-
J3Q14_RS05520 (J3Q14_05520)	-	1082831..1083496 (+)	666	WP_002855897.1	acylneuraminate cytidylyltransferase family protein	-
J3Q14_RS05525 (J3Q14_05525)	-	1083484..1084317 (+)	834	WP_002855772.1	CatB-related O-acetyltransferase	-
J3Q14_RS05530 (J3Q14_05530)	waaV	1084309..1085121 (-)	813	WP_002856066.1	glycosyltransferase family 2 protein	-
J3Q14_RS05535 (J3Q14_05535)	waaF	1085180..1086139 (+)	960	WP_002856368.1	lipopolysaccharide heptosyltransferase II	Regulator
J3Q14_RS05540 (J3Q14_05540)	gmhA	1086120..1086680 (-)	561	WP_002855785.1	D-sedoheptulose 7-phosphate isomerase	-
J3Q14_RS05545 (J3Q14_05545)	rfaE1	1086677..1088071 (-)	1395	WP_032581686.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
J3Q14_RS05550 (J3Q14_05550)	rfaD	1088064..1089017 (-)	954	WP_002856483.1	ADP-glyceromanno-heptose 6-epimerase	-
J3Q14_RS05555 (J3Q14_05555)	gmhB	1089018..1089578 (-)	561	WP_002911679.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
J3Q14_RS05560 (J3Q14_05560)	-	1089660..1089962 (+)	303	WP_002852762.1	cytochrome c	-
J3Q14_RS05565 (J3Q14_05565)	ccoS	1089985..1090191 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36719.17 Da
• Isoelectric Point: 10.1941

>NTDB_id=478165 J3Q14_RS05535 WP_002856368.1 1085180..1086139(+) (waaF) [Campylobacter jejuni strain RM1477]
MKIFIHLPTWLGDAVMASPALYAIKEHFKDAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTNFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=478165 J3Q14_RS05535 WP_002856368.1 1085180..1086139(+) (waaF) [Campylobacter jejuni strain RM1477]
ATGAAAATTTTTATACACCTTCCAACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
CTTTAAAGATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGTTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAATTTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.611	100	0.956