Detailed information NTG0477886

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: J3Q18_RS05500
• Genome accession: NZ_CP071580
• Coordinates: 1083135..1084094 (+)
• Length: 319 a.a.
• NCBI ID: WP_002856368.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain R23
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1078135..1089094

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J3Q18_RS05475 (J3Q18_05475)	neuB	1078634..1079674 (+)	1041	WP_002870496.1	N-acetylneuraminate synthase	-
J3Q18_RS05480 (J3Q18_05480)	neuC	1079671..1080789 (+)	1119	WP_002911676.1	UDP-N-acetylglucosamine 2-epimerase	-
J3Q18_RS05485 (J3Q18_05485)	-	1080786..1081451 (+)	666	WP_002855897.1	acylneuraminate cytidylyltransferase family protein	-
J3Q18_RS05490 (J3Q18_05490)	-	1081439..1082272 (+)	834	WP_002855772.1	CatB-related O-acetyltransferase	-
J3Q18_RS05495 (J3Q18_05495)	waaV	1082264..1083076 (-)	813	WP_002856066.1	glycosyltransferase family 2 protein	-
J3Q18_RS05500 (J3Q18_05500)	waaF	1083135..1084094 (+)	960	WP_002856368.1	lipopolysaccharide heptosyltransferase II	Regulator
J3Q18_RS05505 (J3Q18_05505)	gmhA	1084075..1084635 (-)	561	WP_002855785.1	D-sedoheptulose 7-phosphate isomerase	-
J3Q18_RS05510 (J3Q18_05510)	rfaE1	1084632..1086017 (-)	1386	WP_002856251.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
J3Q18_RS05515 (J3Q18_05515)	rfaD	1086010..1086963 (-)	954	WP_002856483.1	ADP-glyceromanno-heptose 6-epimerase	-
J3Q18_RS05520 (J3Q18_05520)	gmhB	1086964..1087524 (-)	561	WP_002911679.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
J3Q18_RS05525 (J3Q18_05525)	-	1087606..1087908 (+)	303	WP_002852762.1	cytochrome c	-
J3Q18_RS05530 (J3Q18_05530)	ccoS	1087931..1088137 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36719.17 Da
• Isoelectric Point: 10.1941

>NTDB_id=477886 J3Q18_RS05500 WP_002856368.1 1083135..1084094(+) (waaF) [Campylobacter jejuni strain R23]
MKIFIHLPTWLGDAVMASPALYAIKEHFKDAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTNFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=477886 J3Q18_RS05500 WP_002856368.1 1083135..1084094(+) (waaF) [Campylobacter jejuni strain R23]
ATGAAAATTTTTATACACCTTCCAACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
CTTTAAAGATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGTTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAATTTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.611	100	0.956