Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   H8Z70_RS05950 Genome accession   NZ_CP060460
Coordinates   1401833..1402234 (+) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas citri pv. citri strain DAR84832     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1396833..1407234
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H8Z70_RS05930 (H8Z70_05930) tsaB 1398058..1398777 (+) 720 WP_003482499.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  H8Z70_RS05935 (H8Z70_05935) - 1398774..1399691 (+) 918 Protein_1161 ADP-ribosylglycohydrolase family protein -
  H8Z70_RS05940 (H8Z70_05940) - 1399765..1400640 (-) 876 WP_005913700.1 TonB family protein -
  H8Z70_RS05945 (H8Z70_05945) gshB 1400637..1401596 (-) 960 WP_040244728.1 glutathione synthase -
  H8Z70_RS05950 (H8Z70_05950) pilG 1401833..1402234 (+) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  H8Z70_RS05955 (H8Z70_05955) - 1402252..1402614 (+) 363 WP_005913708.1 response regulator -
  H8Z70_RS05960 (H8Z70_05960) - 1402614..1403144 (+) 531 WP_015463484.1 chemotaxis protein CheW -
  H8Z70_RS05965 (H8Z70_05965) - 1403184..1405220 (+) 2037 WP_003482481.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=476249 H8Z70_RS05950 WP_005913706.1 1401833..1402234(+) (pilG) [Xanthomonas citri pv. citri strain DAR84832]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=476249 H8Z70_RS05950 WP_005913706.1 1401833..1402234(+) (pilG) [Xanthomonas citri pv. citri strain DAR84832]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTCATCGATGACTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684