Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilQ   Type   Machinery gene
Locus tag   H7A79_RS09230 Genome accession   NZ_CP060414
Coordinates   1764189..1766342 (-) Length   717 a.a.
NCBI ID   WP_187000051.1    Uniprot ID   A0A7H1M8G8
Organism   Neisseria musculi strain NW831     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1759189..1771342
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7A79_RS09215 (H7A79_1704) pta 1759862..1761373 (-) 1512 WP_187000048.1 phosphate acetyltransferase -
  H7A79_RS09220 (H7A79_1705) aroB 1762053..1763132 (-) 1080 WP_187000049.1 3-dehydroquinate synthase -
  H7A79_RS09225 (H7A79_1706) - 1763300..1763860 (-) 561 WP_187000050.1 shikimate kinase -
  H7A79_RS09230 (H7A79_1707) pilQ 1764189..1766342 (-) 2154 WP_187000051.1 type IV pilus secretin PilQ Machinery gene
  H7A79_RS09235 (H7A79_1708) pilP 1766357..1766887 (-) 531 WP_187000052.1 pilus assembly protein PilP Machinery gene
  H7A79_RS09240 (H7A79_1709) pilO 1766905..1767546 (-) 642 WP_187000053.1 type 4a pilus biogenesis protein PilO -
  H7A79_RS09245 (H7A79_1710) - 1767550..1768158 (-) 609 WP_187000054.1 PilN domain-containing protein -
  H7A79_RS09250 (H7A79_1711) pilM 1768160..1769257 (-) 1098 WP_135034360.1 type IV pilus assembly protein PilM -

Sequence

Protein


Download         Length: 717 a.a.        Molecular weight: 78113.35 Da        Isoelectric Point: 9.8900

>NTDB_id=475837 H7A79_RS09230 WP_187000051.1 1764189..1766342(-) (pilQ) [Neisseria musculi strain NW831]
MNSRNIKKIFAAISIGFAVQTAFAGNITDINVSSLPNNQKIIKIKFDKDAATPRGFITTTPARIALDFSNTNVQLPQPVL
EYADPLINQITAAQNNDRTRILLGLNKAGQYNTEIKGNEVWVYVSEAAGQTTRTPQQPANPAASAAVHPPRREQAVASAN
IDFRKGVRNSGIVELNALGFTGQPDIKKQNDRITVTLKNYPLPAQAQRSLDVSDFNTPVRNVTMKRIGNDTQLVIRNQGS
WDVDTQSANGRFSFEISRKANIASQGLSATPNKSFNGRKISLDFQDVEVRTILQILAKESGMNIVASDTVNGKMTLSLKD
VPWDQALDLVMQARNLDMRRQGNIINVAPREELLAKDKATLQAQKEIDDLGPLLSQTFQLKYKNVEEFRKILRLDESGSS
SDRNTLLSGRGSALIDPATNTLIITDNRTVIQKFQKLIDELDVPTRQVMVEARIVEAEDSFSRNIGVKFGYTGINGRSSW
ASNWADATGNTTTNYNNNLARANTILSGSNTIPSASPLAMNPNISLPVSAATSSIALVRAVSSGALGLELAAMQEQGRGK
IISNPRVLTQDRNEATIESGTDIPYQEATSSGATSTSFKKAVLGLTVTPNITPDGHIIMSVKINKDSPNFSCNQSGEPCI
STKRLQTQTMVEDGGTLIVGGIYEEDNSNTISKVPVLGDIPVLGNLFKSRARKETRKELLIFITPRIVDNVGSNLRY

Nucleotide


Download         Length: 2154 bp        

>NTDB_id=475837 H7A79_RS09230 WP_187000051.1 1764189..1766342(-) (pilQ) [Neisseria musculi strain NW831]
ATGAACTCACGCAACATTAAAAAAATATTTGCCGCCATCAGCATCGGCTTTGCCGTTCAGACGGCCTTTGCAGGCAACAT
TACCGATATCAACGTATCGTCTTTGCCAAATAACCAGAAAATCATCAAAATCAAATTTGATAAAGATGCAGCCACTCCGC
GCGGCTTCATTACCACCACACCTGCGCGTATCGCTCTGGATTTCAGCAACACCAACGTGCAATTGCCGCAGCCTGTGTTG
GAATACGCCGATCCGTTGATTAACCAAATCACAGCCGCCCAAAACAATGACCGTACCCGTATTCTGTTGGGTTTGAACAA
AGCCGGCCAATACAACACCGAAATCAAAGGCAATGAAGTGTGGGTGTATGTGAGTGAGGCGGCCGGCCAAACCACCCGGA
CCCCGCAACAACCCGCCAACCCGGCCGCATCTGCTGCAGTTCATCCGCCCCGCCGCGAGCAGGCGGTTGCATCTGCCAAT
ATCGATTTCCGTAAAGGTGTCCGCAACTCAGGCATTGTTGAGTTGAATGCCTTGGGCTTTACCGGCCAGCCGGATATCAA
AAAACAGAACGACCGCATCACCGTTACGCTGAAAAACTACCCGCTGCCTGCCCAGGCGCAACGCAGCTTGGATGTAAGCG
ATTTCAACACCCCCGTCCGCAACGTAACCATGAAACGCATCGGCAACGATACCCAACTGGTTATCCGCAACCAAGGCAGC
TGGGATGTAGACACACAATCCGCCAATGGCCGCTTCAGTTTTGAAATCAGCCGCAAAGCCAACATCGCTTCGCAGGGTTT
GTCTGCTACACCCAACAAATCGTTTAACGGCCGCAAAATTTCTTTAGATTTCCAAGATGTGGAAGTGCGTACCATTCTGC
AGATTCTCGCCAAAGAATCCGGTATGAATATCGTTGCCAGCGACACCGTTAACGGCAAAATGACGCTTTCCTTGAAAGAT
GTGCCGTGGGATCAGGCATTGGATTTGGTGATGCAGGCGCGCAATCTCGATATGCGCCGCCAGGGCAATATCATTAATGT
TGCGCCCCGTGAAGAGCTGTTGGCTAAAGATAAAGCCACCTTGCAGGCGCAAAAAGAAATCGATGATCTCGGCCCCTTGT
TGTCGCAAACATTCCAGTTGAAATATAAAAACGTAGAAGAGTTCCGCAAAATCCTGCGTTTAGACGAAAGCGGCAGCAGC
AGCGACCGCAACACATTGTTGAGCGGACGCGGCAGCGCGTTAATCGACCCGGCCACCAACACCTTGATTATTACCGATAA
CCGCACGGTTATCCAAAAATTCCAAAAGCTGATTGACGAGCTTGATGTGCCCACCCGCCAAGTGATGGTGGAGGCCCGGA
TTGTTGAAGCAGAAGATAGTTTCTCACGGAACATCGGCGTCAAATTCGGCTATACCGGGATTAACGGCCGCTCCTCATGG
GCTTCCAATTGGGCGGATGCAACCGGCAACACCACAACCAACTATAACAACAACCTGGCAAGAGCCAATACGATTCTCAG
CGGCTCGAATACGATTCCTTCTGCCTCGCCGCTGGCCATGAATCCGAATATCAGCCTGCCGGTTTCTGCCGCCACTTCCA
GCATTGCGCTGGTTCGTGCGGTTTCATCGGGTGCGCTGGGCTTGGAGTTGGCTGCAATGCAAGAACAAGGAAGGGGTAAG
ATTATTTCGAATCCTCGTGTACTGACTCAAGATCGAAATGAAGCCACCATTGAATCGGGGACGGATATTCCCTATCAAGA
AGCAACTTCAAGTGGAGCGACATCTACTTCATTTAAAAAGGCTGTATTGGGATTAACTGTAACACCTAATATTACACCTG
ATGGGCATATAATCATGAGCGTAAAAATCAACAAAGATTCACCAAATTTTTCATGTAATCAATCTGGTGAACCCTGTATT
AGTACTAAGCGCCTCCAAACTCAAACTATGGTCGAAGATGGAGGAACTCTAATTGTTGGGGGCATTTATGAAGAAGATAA
TAGTAACACTATCTCTAAAGTACCTGTGTTAGGAGATATACCTGTATTAGGTAATCTGTTTAAATCGCGTGCCCGAAAAG
AAACTCGAAAAGAACTGCTTATTTTTATTACACCACGTATCGTAGATAATGTTGGTAGTAATCTGAGGTACTAA

Domains

Predicted by InterproScan.

Bacterial type II and III secretion system protein (Secretin)

(552-709)

Secretin and TonB N terminus short domain (STN)

(303-347)

Bacterial type II/III secretion system short domain (Secretin_N)

(376-447)

AMIN domain (AMIN)

(38-115)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H1M8G8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilQ Neisseria gonorrhoeae strain FA1090

58.289

100

0.608
  pilQ Neisseria meningitidis M1080

55.414

100

0.607
  pilQ Neisseria meningitidis MC58

62.963

79.079

0.498