Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   H7F25_RS03895 Genome accession   NZ_CP060191
Coordinates   847582..847779 (+) Length   65 a.a.
NCBI ID   WP_133743989.1    Uniprot ID   -
Organism   Bacillus sp. PAMC28571     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 842582..852779
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7F25_RS03865 (H7F25_03865) - 842999..843178 (+) 180 WP_008348517.1 YjzC family protein -
  H7F25_RS03870 (H7F25_03870) - 843342..844607 (+) 1266 WP_034282089.1 MFS transporter -
  H7F25_RS03875 (H7F25_03875) - 844719..844913 (-) 195 WP_003211779.1 YjzD family protein -
  H7F25_RS03880 (H7F25_03880) - 845126..845866 (+) 741 WP_024425057.1 hypothetical protein -
  H7F25_RS03885 (H7F25_03885) - 845940..846515 (+) 576 WP_024425056.1 hypothetical protein -
  H7F25_RS03890 (H7F25_03890) med 846607..847569 (+) 963 WP_122631175.1 BMP family ABC transporter substrate-binding protein Regulator
  H7F25_RS03895 (H7F25_03895) comZ 847582..847779 (+) 198 WP_133743989.1 ComZ family protein Regulator
  H7F25_RS03900 (H7F25_03900) - 847790..848023 (-) 234 WP_024425053.1 hypothetical protein -
  H7F25_RS03905 (H7F25_03905) - 848195..849133 (+) 939 WP_024425052.1 beta-ketoacyl-ACP synthase III -
  H7F25_RS03910 (H7F25_03910) fabF 849155..850396 (+) 1242 WP_024425051.1 beta-ketoacyl-ACP synthase II -
  H7F25_RS03915 (H7F25_03915) - 850474..851277 (+) 804 WP_185854240.1 DUF2268 domain-containing protein -
  H7F25_RS03920 (H7F25_03920) - 851427..852407 (+) 981 WP_025093401.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7391.42 Da        Isoelectric Point: 4.1509

>NTDB_id=474344 H7F25_RS03895 WP_133743989.1 847582..847779(+) (comZ) [Bacillus sp. PAMC28571]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLTLFTSVMQEAYELGKADAESEKATD

Nucleotide


Download         Length: 198 bp        

>NTDB_id=474344 H7F25_RS03895 WP_133743989.1 847582..847779(+) (comZ) [Bacillus sp. PAMC28571]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCGAAGGAAGAGTTAGATAAAGC
AGGGATTCAGCTTGAGCCTGAAGCACTTCAGCCGCTTCTAACATTATTTACATCTGTCATGCAAGAAGCATACGAGCTTG
GAAAAGCAGATGCAGAATCAGAAAAAGCCACAGATTAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677