Detailed information NTG0471032

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: I6K87_RS07580
• Genome accession: NZ_CP069892
• Coordinates: 1538331..1539428 (-)
• Length: 365 a.a.
• NCBI ID: WP_003027889.1
• Uniprot ID: A0ABD7NID5
• Organism: Streptococcus anginosus strain FDAARGOS_1357
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1533331..1544428

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6K87_RS07560 (I6K87_07560)	-	1533817..1534506 (+)	690	WP_003027894.1	triose-phosphate isomerase	-
I6K87_RS07565 (I6K87_07565)	galE	1534527..1535522 (+)	996	WP_065426971.1	UDP-glucose 4-epimerase GalE	-
I6K87_RS07570 (I6K87_07570)	trpS	1535604..1536629 (+)	1026	WP_059221671.1	tryptophan--tRNA ligase	-
I6K87_RS07575 (I6K87_07575)	guaB	1536761..1538242 (+)	1482	WP_003030719.1	IMP dehydrogenase	-
I6K87_RS07580 (I6K87_07580)	recF	1538331..1539428 (-)	1098	WP_003027889.1	DNA replication/repair protein RecF	Machinery gene
I6K87_RS07585 (I6K87_07585)	yaaA	1539430..1539807 (-)	378	WP_003031580.1	S4 domain-containing protein YaaA	-
I6K87_RS07590 (I6K87_07590)	yfmF	1539983..1541230 (+)	1248	WP_070670720.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
I6K87_RS07595 (I6K87_07595)	yfmH	1541230..1542525 (+)	1296	WP_049533456.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
I6K87_RS07600 (I6K87_07600)	rodZ	1542663..1543484 (+)	822	WP_049533455.1	cytoskeleton protein RodZ	-
I6K87_RS07605 (I6K87_07605)	pgsA	1543495..1544034 (+)	540	WP_003027883.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41938.33 Da
• Isoelectric Point: 8.9222

>NTDB_id=471032 I6K87_RS07580 WP_003027889.1 1538331..1539428(-) (recF) [Streptococcus anginosus strain FDAARGOS_1357]
MWLKKLQIQHFRNYEATEIDFHSGLNIFLGQNAQGKTNILEAIYFLALTRSHRTRSDKDLIYFSKDTLKISGQLVKQTGK
ISLEIDLTPKGRITKVNHLKQSKLSDYVGNMNVILFAPEDLQLIKGAPALRRKFIDIELGQIKPIYLSDLSHYHHVLKQR
NTYLKTAKTIDETFLAVLDDQLVEFGCRVMQHRIEFLKKLEHFGQQKHLELSSHLENLTIKYCSSVPLSDSNKLKESFQI
ALKQSRSRDLFKKNTGVGPHRDDIAFCINDMNANFGSQGQHRSVVLSLKLAEIELMETVTKEKPILLLDDVMSELDNSRQ
LNLLETISQNIQTFMTTTTLEHLQNVPSNIKIFSIHEGHLTEDKV

Nucleotide

• Length: 1098 bp

>NTDB_id=471032 I6K87_RS07580 WP_003027889.1 1538331..1539428(-) (recF) [Streptococcus anginosus strain FDAARGOS_1357]
ATGTGGTTAAAAAAGTTACAAATTCAACATTTTCGTAATTATGAAGCAACTGAAATAGATTTTCATTCTGGTCTCAATAT
TTTTCTAGGCCAAAATGCTCAAGGAAAAACAAATATCTTGGAAGCCATCTATTTTCTTGCATTGACACGAAGTCATCGAA
CTCGTTCAGACAAAGATTTAATTTATTTCTCCAAAGACACCCTAAAAATATCTGGACAACTTGTCAAGCAAACGGGGAAA
ATCTCTTTAGAGATTGACTTGACACCTAAAGGAAGAATTACAAAGGTTAATCATCTAAAACAAAGCAAACTATCTGATTA
TGTTGGAAATATGAATGTTATTTTATTTGCTCCAGAAGATTTACAGTTGATTAAAGGAGCTCCAGCCCTTAGACGAAAAT
TTATTGATATAGAATTGGGGCAAATTAAGCCAATCTATTTATCTGATTTATCACATTACCACCATGTTTTAAAACAAAGA
AATACTTATTTAAAAACAGCAAAAACAATAGATGAGACTTTTTTAGCAGTTTTAGATGATCAACTAGTGGAATTTGGTTG
TCGTGTTATGCAGCATCGGATAGAATTTCTCAAAAAATTAGAGCACTTTGGTCAACAAAAACATTTGGAACTCTCAAGTC
ATTTAGAAAACTTAACCATTAAGTACTGCTCTTCTGTTCCACTTTCAGATTCCAATAAGTTAAAAGAATCCTTCCAAATT
GCATTAAAGCAAAGCCGTAGTAGAGATTTATTTAAAAAAAATACTGGAGTTGGTCCCCATCGAGATGATATTGCTTTTTG
TATCAATGACATGAATGCCAATTTTGGTAGTCAAGGACAACATCGAAGTGTGGTTTTATCTCTCAAACTGGCAGAAATTG
AGCTCATGGAAACTGTTACTAAAGAAAAACCAATTCTTCTACTTGACGATGTTATGAGTGAACTTGACAATAGTCGTCAA
CTTAATTTACTTGAAACTATTTCTCAAAATATCCAAACATTTATGACAACAACAACTCTAGAACATCTACAAAACGTGCC
TTCTAATATTAAAATTTTCTCAATTCATGAAGGACATTTAACTGAAGATAAGGTGTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: A0ABD7NID5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	72.346	98.082	0.71
recF	Bacillus subtilis subsp. subtilis str. 168	47.414	95.342	0.452