Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | SAA6008_RS07995 | Genome accession | NC_017341 |
| Coordinates | 1626039..1626338 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844414.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus subsp. aureus str. JKD6008 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1621039..1631338
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAA6008_RS07970 (SAA6008_01505) | gcvPA | 1622251..1623597 (-) | 1347 | WP_000019684.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| SAA6008_RS07975 (SAA6008_01506) | gcvT | 1623617..1624708 (-) | 1092 | WP_000093351.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| SAA6008_RS07980 (SAA6008_01507) | - | 1624867..1625391 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| SAA6008_RS07985 (SAA6008_01508) | - | 1625381..1625527 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| SAA6008_RS07990 (SAA6008_01509) | comGF | 1625624..1626106 (-) | 483 | WP_014532870.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SAA6008_RS07995 (SAA6008_01510) | comGE | 1626039..1626338 (-) | 300 | WP_000844414.1 | hypothetical protein | Machinery gene |
| SAA6008_RS08000 (SAA6008_01511) | comGD | 1626325..1626771 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SAA6008_RS08005 (SAA6008_01512) | comGC | 1626749..1627060 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SAA6008_RS08010 (SAA6008_01513) | comGB | 1627074..1628144 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SAA6008_RS08015 (SAA6008_01514) | comGA | 1628116..1629090 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SAA6008_RS08020 (SAA6008_01515) | - | 1629142..1629765 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| SAA6008_RS08025 (SAA6008_01516) | - | 1629762..1630091 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| SAA6008_RS08030 (SAA6008_01517) | - | 1630091..1631077 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| SAA6008_RS08035 | - | 1631074..1631277 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11111.24 Da Isoelectric Point: 9.9215
>NTDB_id=46426 SAA6008_RS07995 WP_000844414.1 1626039..1626338(-) (comGE) [Staphylococcus aureus subsp. aureus str. JKD6008]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDMKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDMKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=46426 SAA6008_RS07995 WP_000844414.1 1626039..1626338(-) (comGE) [Staphylococcus aureus subsp. aureus str. JKD6008]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATGAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATGAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |
| comGE | Staphylococcus aureus N315 |
97.98 |
100 |
0.98 |