Detailed information NTG0046295

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: SAOV_RS08060
• Genome accession: NC_017337
• Coordinates: 1614271..1614582 (-)
• Length: 103 a.a.
• NCBI ID: WP_000472256.1
• Uniprot ID: -
• Organism: Staphylococcus aureus subsp. aureus ED133
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1609271..1619582

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SAOV_RS08025 (SAOV_1536)	gcvPA	1609774..1611120 (-)	1347	WP_000019697.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
SAOV_RS08030 (SAOV_1537)	gcvT	1611140..1612231 (-)	1092	WP_000093343.1	glycine cleavage system aminomethyltransferase GcvT	-
SAOV_RS08035 (SAOV_1538)	-	1612389..1612913 (-)	525	WP_001015120.1	shikimate kinase	-
SAOV_RS08040	-	1612903..1613049 (-)	147	WP_001789879.1	hypothetical protein	-
SAOV_RS08045 (SAOV_1539)	comGF	1613146..1613643 (-)	498	WP_078061106.1	competence type IV pilus minor pilin ComGF	Machinery gene
SAOV_RS08050 (SAOV_1540)	comGE	1613561..1613860 (-)	300	WP_000844409.1	hypothetical protein	Machinery gene
SAOV_RS08055 (SAOV_1541)	comGD	1613847..1614293 (-)	447	WP_001796473.1	competence type IV pilus minor pilin ComGD	Machinery gene
SAOV_RS08060 (SAOV_1542)	comGC	1614271..1614582 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
SAOV_RS08065 (SAOV_1543)	comGB	1614596..1615666 (-)	1071	WP_000776418.1	competence type IV pilus assembly protein ComGB	Machinery gene
SAOV_RS08070 (SAOV_1544)	comGA	1615638..1616612 (-)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
SAOV_RS08075 (SAOV_1545)	-	1616664..1617287 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
SAOV_RS08080 (SAOV_1546)	-	1617284..1617613 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
SAOV_RS08085 (SAOV_1547)	-	1617613..1618599 (-)	987	WP_000161317.1	ROK family glucokinase	-
SAOV_RS08090 (SAOV_1548)	-	1618596..1618799 (-)	204	WP_000087561.1	YqgQ family protein	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.36 Da
• Isoelectric Point: 8.5268

>NTDB_id=46295 SAOV_RS08060 WP_000472256.1 1614271..1614582(-) (comGC) [Staphylococcus aureus subsp. aureus ED133]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=46295 SAOV_RS08060 WP_000472256.1 1614271..1614582(-) (comGC) [Staphylococcus aureus subsp. aureus ED133]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	100	100	1
comGC	Staphylococcus aureus N315	100	100	1
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369