Detailed information NTG0046198

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: BSU6051_RS06145
• Genome accession: NC_020507
• Coordinates: 1222530..1223447 (+)
• Length: 305 a.a.
• NCBI ID: WP_003232954.1
• Uniprot ID: A0A9W5LHY5
• Organism: Bacillus subtilis subsp. subtilis 6051-HGW
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1217530..1228447

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSU6051_RS06130 (BSU6051_11420)	trpS	1218110..1219102 (-)	993	WP_003245134.1	tryptophan--tRNA ligase	-
BSU6051_RS06135 (BSU6051_11430)	oppA	1219846..1221483 (+)	1638	WP_003232957.1	oligopeptide ABC transporter substrate-binding protein OppA	-
BSU6051_RS06140 (BSU6051_11440)	oppB	1221591..1222526 (+)	936	WP_003245554.1	oligopeptide ABC transporter permease OppB	-
BSU6051_RS06145 (BSU6051_11450)	amiD	1222530..1223447 (+)	918	WP_003232954.1	oligopeptide ABC transporter permease OppC	Regulator
BSU6051_RS06150 (BSU6051_11460)	oppD	1223452..1224528 (+)	1077	WP_014906294.1	oligopeptide ABC transporter ATP-binding protein OppD	-
BSU6051_RS06155 (BSU6051_11470)	oppF	1224530..1225447 (+)	918	WP_003245567.1	oligopeptide ABC transporter ATP-binding protein OppF	-
BSU6051_RS06160 (BSU6051_11480)	yjbB	1225554..1226771 (+)	1218	WP_010886478.1	MFS transporter	-
BSU6051_RS06165 (BSU6051_11490)	yjbC	1226935..1227513 (+)	579	WP_003244921.1	GNAT family N-acetyltransferase	-
BSU6051_RS06170 (BSU6051_11500)	spx	1227694..1228089 (+)	396	WP_003245483.1	transcriptional regulator Spx	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 33621.12 Da
• Isoelectric Point: 10.2873

>NTDB_id=46198 BSU6051_RS06145 WP_003232954.1 1222530..1223447(+) (amiD) [Bacillus subtilis subsp. subtilis 6051-HGW]
MQNIPKNMFEPAAANAGDAEKISKKSLSLWKDAMLRFRSNKLAMVGLIIIVLIILMAIFAPMFSRYDYSTTNLLNADKPP
SKDHWFGTDDLGRDIFVRTWVGARISIFIGVAAAVLDLLIGVIWGSISGFRGGRTDEIMMRIADILWAVPSLLMVILLMV
VLPKGLFTIIIAMTITGWINMARIVRGQVLQLKNQEYVLASQTLGAKTSRLLFKHIVPNAMGSILVTMTLTVPTAIFTEA
FLSYLGLGVPAPLASWGTMASDGLPALTYYPWRLFFPAGFICITMFGFNVVGDGLRDALDPKLRK

Nucleotide

• Length: 918 bp

>NTDB_id=46198 BSU6051_RS06145 WP_003232954.1 1222530..1223447(+) (amiD) [Bacillus subtilis subsp. subtilis 6051-HGW]
ATGCAGAACATTCCAAAAAACATGTTTGAACCAGCCGCAGCGAATGCCGGCGATGCAGAAAAAATAAGTAAAAAGAGCCT
TTCCCTCTGGAAAGATGCGATGCTTCGCTTCCGCAGCAATAAGCTTGCAATGGTCGGGCTTATCATTATCGTACTTATTA
TCCTTATGGCAATTTTTGCGCCGATGTTCTCAAGGTATGATTATTCAACTACTAATCTCTTAAATGCGGATAAGCCGCCT
TCAAAAGATCACTGGTTCGGAACAGATGATCTTGGACGGGACATTTTCGTCCGTACATGGGTAGGGGCGCGAATCTCAAT
CTTTATCGGTGTTGCAGCTGCTGTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAA
GAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTT
GTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTGCGCGG
ACAAGTGCTGCAGCTGAAGAATCAGGAGTATGTGCTTGCTTCACAGACACTGGGTGCAAAAACATCCCGTCTTCTATTTA
AACATATCGTGCCAAACGCAATGGGTTCTATTTTGGTCACGATGACACTGACAGTTCCTACTGCGATTTTTACAGAAGCC
TTTTTAAGCTATTTGGGACTTGGTGTTCCGGCTCCGCTGGCAAGCTGGGGAACGATGGCTTCTGACGGATTGCCTGCATT
GACCTATTATCCGTGGCGTTTATTCTTCCCTGCCGGATTTATCTGCATTACAATGTTTGGTTTTAACGTTGTCGGCGACG
GATTAAGAGACGCATTGGATCCTAAGTTACGTAAATAA

Domains

Predicted by InterProScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (121-305)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-79)

3D structure

• AlphaFold DB: A0A9W5LHY5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	35.922	100	0.364
amiD	Streptococcus thermophilus LMD-9	35.922	100	0.364