Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   JM964_RS03330 Genome accession   NZ_CP068708
Coordinates   674746..675228 (-) Length   160 a.a.
NCBI ID   WP_014637825.1    Uniprot ID   -
Organism   Streptococcus suis strain ID33329     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 669746..680228
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JM964_RS03305 (JM964_03305) pheT 670057..672456 (+) 2400 WP_044680037.1 phenylalanine--tRNA ligase subunit beta -
  JM964_RS03310 (JM964_03310) - 672511..672777 (+) 267 WP_014637821.1 DUF2087 domain-containing protein -
  JM964_RS03315 (JM964_03315) - 672798..673100 (-) 303 WP_014637822.1 hypothetical protein -
  JM964_RS03320 (JM964_03320) - 673293..674036 (+) 744 WP_044673815.1 polyphosphate polymerase domain-containing protein -
  JM964_RS03325 (JM964_03325) - 674023..674700 (+) 678 WP_044673817.1 DUF4956 domain-containing protein -
  JM964_RS03330 (JM964_03330) mutX 674746..675228 (-) 483 WP_014637825.1 NUDIX hydrolase Machinery gene
  JM964_RS03335 (JM964_03335) folE 675395..675958 (+) 564 WP_023369986.1 GTP cyclohydrolase I FolE -
  JM964_RS03340 (JM964_03340) folP 675967..676779 (+) 813 WP_044667305.1 dihydropteroate synthase -
  JM964_RS03345 (JM964_03345) folB 676772..677134 (+) 363 WP_023369981.1 dihydroneopterin aldolase -
  JM964_RS03350 (JM964_03350) folK 677131..677619 (+) 489 WP_023369979.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  JM964_RS03355 (JM964_03355) - 677670..678980 (+) 1311 WP_024384802.1 GntP family permease -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18496.88 Da        Isoelectric Point: 4.5662

>NTDB_id=460876 JM964_RS03330 WP_014637825.1 674746..675228(-) (mutX) [Streptococcus suis strain ID33329]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREVFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLTKPTWEGDRHFQEWLLEGKPFFSACFRYDGDKLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=460876 JM964_RS03330 WP_014637825.1 674746..675228(-) (mutX) [Streptococcus suis strain ID33329]
ATGACCAAGAAACCCGTCCAACTCGCTACCATTTGCTACATTGATAATGGCAAGGAATTTCTCCTGCTCCATCGCAATAA
AAAAGAAAACGATGTCCATCAAGGGAAATGGATTGGGGTCGGTGGCAAGCTGGAACCTGGCGAAACACCACAGGCTTGCG
CTATTCGTGAAGTCTTTGAGGAAACTGGGCTTACTGTAACGAAGCATGCTCTAAAAGGAGTCATCACCTTTCCAGACTTC
ACACCAAACACTGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTCTTATTGACTGCAATGAAGGTGA
CTTAGAGTGGGTTCCTTACGACCAGGTCTTAACCAAACCAACCTGGGAGGGCGACCGGCATTTTCAAGAATGGCTATTAG
AGGGCAAACCATTTTTTTCCGCTTGCTTCCGCTATGATGGGGACAAACTGCTGGATTACAGTGTTGATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

79.739

95.625

0.763