Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | JMJ71_RS05650 | Genome accession | NZ_CP068581 |
| Coordinates | 1077128..1077433 (+) | Length | 101 a.a. |
| NCBI ID | WP_002790525.1 | Uniprot ID | - |
| Organism | Campylobacter coli strain CC19CH075 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1072128..1082433
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMJ71_RS05625 (JMJ71_05625) | rpsR | 1072486..1072746 (+) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
| JMJ71_RS05630 (JMJ71_05630) | lon | 1072802..1075177 (-) | 2376 | WP_170876373.1 | endopeptidase La | - |
| JMJ71_RS05635 (JMJ71_05635) | - | 1075193..1075840 (-) | 648 | WP_002780248.1 | outer membrane protein assembly factor BamD | - |
| JMJ71_RS05640 (JMJ71_05640) | fliW | 1076005..1076394 (+) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| JMJ71_RS05645 (JMJ71_05645) | proC | 1076394..1077131 (+) | 738 | WP_002780246.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| JMJ71_RS05650 (JMJ71_05650) | ctsT | 1077128..1077433 (+) | 306 | WP_002790525.1 | hypothetical protein | Machinery gene |
| JMJ71_RS05655 (JMJ71_05655) | - | 1077426..1078094 (+) | 669 | WP_002790524.1 | hypothetical protein | - |
| JMJ71_RS05660 (JMJ71_05660) | - | 1078091..1078543 (+) | 453 | WP_002777117.1 | hypothetical protein | - |
| JMJ71_RS05665 (JMJ71_05665) | - | 1078536..1079165 (-) | 630 | WP_002783358.1 | uroporphyrinogen-III synthase | - |
| JMJ71_RS05670 (JMJ71_05670) | thiE | 1079143..1079775 (-) | 633 | WP_162284675.1 | thiamine phosphate synthase | - |
| JMJ71_RS05675 (JMJ71_05675) | thiD | 1079765..1080577 (-) | 813 | WP_002822374.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| JMJ71_RS05680 (JMJ71_05680) | - | 1080577..1081260 (-) | 684 | WP_060785324.1 | 3-methyladenine DNA glycosylase | - |
| JMJ71_RS05685 (JMJ71_05685) | - | 1081257..1082018 (-) | 762 | WP_072212081.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12410.27 Da Isoelectric Point: 6.0617
>NTDB_id=459871 JMJ71_RS05650 WP_002790525.1 1077128..1077433(+) (ctsT) [Campylobacter coli strain CC19CH075]
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFINDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFINDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=459871 JMJ71_RS05650 WP_002790525.1 1077128..1077433(+) (ctsT) [Campylobacter coli strain CC19CH075]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTATAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTATAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
48.98 |
97.03 |
0.475 |