Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   JJN14_RS02055 Genome accession   NZ_CP067992
Coordinates   410641..411690 (+) Length   349 a.a.
NCBI ID   WP_201058767.1    Uniprot ID   -
Organism   Streptococcus mitis strain S022-V7-A3     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 405641..416690
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JJN14_RS02025 (JJN14_02025) dnaJ 405765..406901 (+) 1137 WP_001066308.1 molecular chaperone DnaJ -
  JJN14_RS02030 (JJN14_02030) - 406979..407632 (-) 654 WP_201058765.1 hypothetical protein -
  JJN14_RS02040 (JJN14_02040) - 409138..409425 (-) 288 WP_000777754.1 hypothetical protein -
  JJN14_RS02045 (JJN14_02045) - 409435..409845 (-) 411 WP_201058766.1 HIT family protein -
  JJN14_RS02050 (JJN14_02050) pptA 409913..410644 (+) 732 WP_000889954.1 ABC transporter ATP-binding protein Regulator
  JJN14_RS02055 (JJN14_02055) pptB 410641..411690 (+) 1050 WP_201058767.1 ABC transporter permease Regulator
  JJN14_RS02060 (JJN14_02060) - 411752..412081 (-) 330 WP_201058768.1 helicase BlpT -
  JJN14_RS02065 (JJN14_02065) - 412358..412696 (+) 339 WP_150922867.1 LytTR family DNA-binding domain-containing protein -
  JJN14_RS02070 (JJN14_02070) comE/blpR 412701..413438 (+) 738 WP_201058769.1 response regulator transcription factor Regulator
  JJN14_RS02075 (JJN14_02075) - 413452..414801 (+) 1350 WP_201058770.1 sensor histidine kinase -
  JJN14_RS02080 (JJN14_02080) - 414870..415226 (+) 357 WP_033679716.1 hypothetical protein -
  JJN14_RS02085 (JJN14_02085) - 415928..416092 (+) 165 WP_201058771.1 hypothetical protein -
  JJN14_RS02090 (JJN14_02090) - 416089..416493 (+) 405 WP_201058772.1 immunity protein -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 40461.56 Da        Isoelectric Point: 10.0602

>NTDB_id=458204 JJN14_RS02055 WP_201058767.1 410641..411690(+) (pptB) [Streptococcus mitis strain S022-V7-A3]
MKDLFLKRKQAFRKECLGYLRYVLNDHFVLFLLVLLGFLAYQYSQLLQDFPENHWPILLFVGITSVLLLLWGGIATYMEA
PDKLFLLVGEEEIKLHLKRQTGISLVFWLFVQTLFLLLFAPLFLAMGYGLPLFLVYVLLLGVGKYFLFRQKASKFFTETG
LDWDYVISQESKRKQVLLRFFALFTQVKGISNSVKRRAYLDFILKAVQKVPGKIWQNLYLRSYLRNGDLFALSLRLLLLS
ILAQVFIEQAWIATAVVVLFNYLLLFQLLALYHAFDYQYLTQLFPLDKGQKEKGLQAVVRGLTSLVLVVELVVGLITFQE
KRALLALLGAGLVLLVLYLPYQVKRQMQD

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=458204 JJN14_RS02055 WP_201058767.1 410641..411690(+) (pptB) [Streptococcus mitis strain S022-V7-A3]
ATGAAAGACTTGTTTTTAAAGAGAAAGCAGGCTTTTCGTAAGGAGTGTCTTGGTTATCTGCGCTATGTTCTCAATGACCA
CTTTGTCTTGTTCCTGCTTGTCCTGCTGGGCTTTCTAGCCTACCAGTACAGTCAACTCTTGCAGGATTTTCCTGAAAATC
ATTGGCCTATCCTTTTATTTGTAGGAATTACATCTGTTTTACTTTTGCTTTGGGGAGGAATTGCCACCTATATGGAGGCT
CCAGACAAGCTCTTTCTCTTAGTCGGAGAAGAGGAAATCAAACTCCATCTCAAGCGTCAAACTGGCATTTCCCTAGTCTT
TTGGCTCTTTGTTCAGACCCTCTTCTTGCTGTTATTTGCGCCTTTATTTTTGGCAATGGGTTATGGTTTGCCACTTTTTC
TGGTCTATGTGCTTTTATTGGGGGTAGGAAAATATTTCCTCTTTCGTCAAAAGGCCAGCAAATTTTTCACGGAAACTGGA
CTGGACTGGGACTATGTTATTTCTCAAGAAAGCAAGCGCAAGCAAGTCTTGCTTCGTTTCTTTGCCCTCTTTACGCAGGT
CAAGGGAATTTCAAACAGCGTCAAGCGTCGTGCCTATCTGGACTTTATCCTAAAGGCTGTTCAGAAGGTGCCTGGGAAGA
TTTGGCAAAATCTCTATCTGCGTTCTTATCTGCGAAATGGAGATCTCTTTGCGCTCAGTCTCCGTCTTCTCTTGCTGTCC
ATACTGGCGCAGGTTTTTATCGAGCAAGCTTGGATTGCGACAGCAGTGGTAGTTCTTTTTAACTACCTCTTGCTCTTCCA
GTTGCTGGCCCTCTATCATGCCTTTGATTACCAGTACTTGACCCAACTCTTTCCACTGGATAAGGGGCAAAAGGAAAAAG
GCTTGCAGGCGGTAGTCCGAGGATTGACCAGTTTGGTCTTAGTAGTGGAATTAGTTGTTGGGTTGATTACCTTCCAAGAA
AAACGAGCCCTTCTAGCCTTACTGGGAGCTGGTTTGGTTTTACTAGTCTTGTATTTGCCTTATCAGGTCAAACGTCAGAT
GCAGGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

46.839

99.713

0.467

  pptB Streptococcus thermophilus LMD-9

46.571

100

0.467