Detailed information NTG0045713

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: C663_RS01615
• Genome accession: NC_020244
• Coordinates: 297506..298627 (+)
• Length: 373 a.a.
• NCBI ID: WP_015382685.1
• Uniprot ID: -
• Organism: Bacillus subtilis XF-1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 292506..303627

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C663_RS21170	-	293587..293718 (-)	132	WP_003246334.1	hypothetical protein	-
C663_RS01600 (C663_0270)	ycdB	293892..295313 (+)	1422	WP_015382683.1	YcdB/YcdC domain-containing protein	-
C663_RS01605	ycdC	295500..296863 (+)	1364	Protein_274	YcdB/YcdC domain-containing protein	-
C663_RS01610 (C663_0272)	cwlK	296871..297383 (-)	513	WP_041517631.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
C663_RS01615 (C663_0273)	rapF	297506..298627 (+)	1122	WP_015382685.1	response regulator aspartate phosphatase RapJ	Regulator
C663_RS01620 (C663_0274)	ycdF	298735..299511 (+)	777	WP_015382686.1	SDR family oxidoreductase	-
C663_RS01625 (C663_0275)	ycdG	299536..301221 (+)	1686	WP_015382687.1	alpha-glucosidase	-
C663_RS01630 (C663_0276)	znuA	301409..302368 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
C663_RS01635	znuC	302423..303118 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44444.30 Da
• Isoelectric Point: 4.7895

>NTDB_id=45713 C663_RS01615 WP_015382685.1 297506..298627(+) (rapF) [Bacillus subtilis XF-1]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSADEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=45713 C663_RS01615 WP_015382685.1 297506..298627(+) (rapF) [Bacillus subtilis XF-1]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGCCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGAGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGATGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (196-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405