Detailed information NTG0454624

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: IGS65_RS07970
• Genome accession: NZ_CP066294
• Coordinates: 1604323..1605318 (+)
• Length: 331 a.a.
• NCBI ID: WP_002284808.1
• Uniprot ID: -
• Organism: Streptococcus mutans strain 27-3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1599323..1610318

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IGS65_RS07955 (IGS65_007955)	-	1599618..1600304 (+)	687	WP_002303974.1	DNA alkylation repair protein	-
IGS65_RS07960 (IGS65_007960)	comR	1600700..1601614 (+)	915	WP_002275820.1	helix-turn-helix domain-containing protein	Regulator
IGS65_RS07965 (IGS65_007965)	-	1602146..1603987 (-)	1842	WP_192072009.1	carbohydrate-binding domain-containing protein	-
IGS65_RS07970 (IGS65_007970)	ruvB	1604323..1605318 (+)	996	WP_002284808.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
IGS65_RS07975 (IGS65_007975)	-	1605356..1605781 (+)	426	WP_002278431.1	low molecular weight protein-tyrosine-phosphatase	-
IGS65_RS07980 (IGS65_007980)	-	1605846..1606229 (+)	384	WP_011074470.1	membrane protein	-
IGS65_RS07985 (IGS65_007985)	-	1606226..1608016 (+)	1791	WP_002263405.1	acyltransferase family protein	-
IGS65_RS07990 (IGS65_007990)	thrC	1608698..1610182 (+)	1485	WP_192072010.1	threonine synthase	-

Sequence

Protein

• Length: 331 a.a.
• Molecular weight: 37241.68 Da
• Isoelectric Point: 4.7070

>NTDB_id=454624 IGS65_RS07970 WP_002284808.1 1604323..1605318(+) (ruvB) [Streptococcus mutans strain 27-3]
MTRILDNEPMGDEEFAERTLRPQYLQEYIGQDKVKDQLKIFIKAAKQRDEALDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPAIEKAGDLVAVLNDLEPGDVLFIDEIHRLPMAVEEVLYSAMEDFYIDIMIGAGETSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYADIDLTEIVERTADIFEMTITHQAALELARRSRGTPRIANRLLKRVRDYAQIMGDGLID
DKITDKALTMLDVDHEGLDYVDQKILKTMIEMYHGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIIRTRSGRVATAK
AYEHLGYRYTE

Nucleotide

• Length: 996 bp

>NTDB_id=454624 IGS65_RS07970 WP_002284808.1 1604323..1605318(+) (ruvB) [Streptococcus mutans strain 27-3]
ATGACTAGAATTTTAGATAACGAACCTATGGGTGATGAGGAATTTGCAGAACGCACACTTCGTCCGCAGTATTTACAGGA
ATATATTGGTCAGGATAAGGTTAAAGACCAGCTGAAGATCTTCATCAAAGCAGCTAAACAACGTGATGAGGCTTTGGATC
ATGTCCTTTTATTTGGTCCTCCCGGCCTTGGTAAGACCACCATGGCTTTTGTTATTGCCAATGAATTGGGGGTTAATCTT
AAGCAAACCAGCGGTCCAGCTATTGAAAAAGCTGGTGATTTGGTTGCTGTTTTAAATGACTTAGAGCCTGGGGATGTTCT
TTTTATTGATGAAATTCATCGGCTGCCTATGGCTGTTGAGGAAGTTCTTTATAGTGCCATGGAAGATTTTTATATTGACA
TTATGATTGGTGCGGGAGAAACTTCTCGCAGCGTGCATTTGGATTTGCCGCCTTTTACTTTAATTGGGGCGACAACACGG
GCAGGTATGTTGTCAAATCCTTTGCGGGCGCGTTTTGGGATTACAGGTCATATGGAATATTATGCAGATATCGATTTAAC
TGAAATTGTTGAGCGAACAGCGGATATTTTTGAGATGACCATTACCCATCAAGCTGCGTTAGAATTAGCACGGCGTTCCC
GTGGGACTCCGCGTATTGCTAACCGACTCTTAAAACGTGTTCGAGATTATGCCCAAATTATGGGAGATGGTCTTATTGAT
GATAAAATAACAGATAAGGCTTTGACCATGCTTGATGTTGATCATGAAGGCCTTGATTATGTTGATCAGAAGATCCTTAA
GACGATGATTGAGATGTACCATGGCGGGCCTGTTGGTCTGGGGACTCTGTCAGTTAATATTGCCGAGGAACGTGAGACCG
TTGAAGACATGTATGAGCCCTATCTTATTCAAAAGGGATTTATCATACGGACTCGCAGTGGACGTGTAGCCACTGCCAAA
GCTTATGAACATTTGGGTTATCGTTACACAGAATAA

Domains

Predicted by InterProScan.

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	91.541	100	0.915
ruvB	Streptococcus pneumoniae R6	91.239	100	0.912
ruvB	Streptococcus pneumoniae D39	91.239	100	0.912
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.681	97.583	0.592
ruvB	Helicobacter pylori 26695	50.464	97.583	0.492
ruvB	Synechocystis sp. PCC 6803	50.479	94.562	0.477