Detailed information NTG0450481

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: I6G80_RS20735
• Genome accession: NZ_CP065647
• Coordinates: 3831932..3832849 (-)
• Length: 305 a.a.
• NCBI ID: WP_003180613.1
• Uniprot ID: A0AA90ETR0
• Organism: Bacillus licheniformis strain FDAARGOS_923
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3826932..3837849

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G80_RS20705 (I6G80_20695)	-	3827355..3827483 (-)	129	Protein_4011	hypothetical protein	-
I6G80_RS20710 (I6G80_20700)	-	3827659..3828321 (+)	663	WP_009328832.1	TerC family protein	-
I6G80_RS20715 (I6G80_20705)	spxA	3828544..3828939 (-)	396	WP_009328833.1	transcriptional regulator SpxA	-
I6G80_RS20720 (I6G80_20710)	-	3829117..3829695 (-)	579	WP_003180619.1	GNAT family N-acetyltransferase	-
I6G80_RS20725 (I6G80_20715)	-	3829926..3830849 (-)	924	WP_011197769.1	ABC transporter ATP-binding protein	-
I6G80_RS20730 (I6G80_20720)	-	3830851..3831918 (-)	1068	WP_003180615.1	ABC transporter ATP-binding protein	-
I6G80_RS20735 (I6G80_20725)	amiD	3831932..3832849 (-)	918	WP_003180613.1	ABC transporter permease	Regulator
I6G80_RS20740 (I6G80_20730)	-	3832854..3833789 (-)	936	WP_003180611.1	ABC transporter permease	-
I6G80_RS20745 (I6G80_20735)	-	3833885..3835510 (-)	1626	WP_003180610.1	peptide ABC transporter substrate-binding protein	-
I6G80_RS20750 (I6G80_20740)	trpS	3836248..3837240 (+)	993	WP_003180607.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 33952.29 Da
• Isoelectric Point: 8.8249

>NTDB_id=450481 I6G80_RS20735 WP_003180613.1 3831932..3832849(-) (amiD) [Bacillus licheniformis strain FDAARGOS_923]
MQQIPKDMFEPAAVDHSEAEKISKKNLSFWTDVFLRFKENKLALFGLVVLILIALMAIFAPVFSSFQYEETDLTNANQPP
SGEHWFGTDDLGRDVFVRTWVGARISLTIGLAAALIDVLIGVIWGAISGIRGGRTDEIMMRIADILWAIPSLLMTILLLV
VMGKGLITMIVAMVITGWINMARIVRGQVLQLKNQEFVLASRTLGAKNSRIIRKHLLPNIMSPILVTMTLTVPTAIFYEA
FLSYLGLGVPQPLASWGTMATDGVQGLEYYPWRLFFPATFICLTMFAFNVIGDGLRDALDPKLRK

Nucleotide

• Length: 918 bp

>NTDB_id=450481 I6G80_RS20735 WP_003180613.1 3831932..3832849(-) (amiD) [Bacillus licheniformis strain FDAARGOS_923]
ATGCAGCAAATACCAAAAGACATGTTTGAACCTGCAGCTGTTGACCATAGCGAAGCCGAAAAGATCTCAAAGAAAAACCT
TTCTTTTTGGACAGACGTATTCTTGAGATTTAAAGAAAACAAGCTGGCGCTGTTTGGACTGGTGGTTCTGATCCTGATCG
CTCTGATGGCTATCTTCGCGCCGGTGTTCTCAAGCTTTCAATATGAAGAAACAGATTTAACGAATGCGAACCAGCCGCCA
AGCGGTGAGCACTGGTTTGGAACAGATGACCTTGGAAGGGACGTATTCGTCCGTACATGGGTCGGCGCCCGCATCTCGCT
GACAATCGGACTCGCTGCTGCGCTGATCGACGTTTTGATCGGTGTGATATGGGGTGCGATTTCCGGCATCAGAGGCGGAC
GTACGGATGAAATTATGATGAGAATAGCAGATATTTTATGGGCGATTCCTTCTTTATTAATGACCATCCTGCTGCTCGTT
GTTATGGGAAAAGGCCTGATCACGATGATCGTGGCGATGGTTATTACGGGCTGGATCAACATGGCGAGAATCGTCCGGGG
CCAAGTACTCCAGCTTAAAAATCAGGAGTTCGTACTCGCCTCAAGAACATTGGGAGCGAAAAACTCGCGCATTATCAGAA
AGCACCTGCTGCCCAACATCATGAGCCCGATCTTGGTCACCATGACATTAACCGTTCCTACGGCTATTTTCTATGAGGCG
TTTTTAAGCTACCTCGGCCTCGGGGTTCCGCAGCCGCTTGCAAGCTGGGGAACGATGGCAACAGACGGTGTTCAGGGATT
GGAATACTACCCTTGGCGCCTGTTCTTCCCGGCTACTTTTATCTGTCTGACCATGTTTGCATTCAACGTTATCGGCGACG
GACTGCGCGACGCTTTAGATCCGAAGCTGCGTAAATAA

Domains

Predicted by InterProScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (121-305)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-80)

3D structure

• AlphaFold DB: A0AA90ETR0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	35.922	100	0.364
amiD	Streptococcus thermophilus LMG 18311	35.599	100	0.361
amiD	Streptococcus thermophilus LMD-9	35.599	100	0.361