Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   STT55_RS05520 Genome accession   NZ_CP065502
Coordinates   1047465..1047947 (-) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus strain ST55     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1042465..1052947
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STT55_RS05500 (STT55_05460) pepT 1042945..1044168 (-) 1224 WP_180477007.1 peptidase T -
  STT55_RS05505 (STT55_05465) lepB 1044377..1044934 (-) 558 WP_002953084.1 signal peptidase I -
  STT55_RS05510 (STT55_05470) - 1045057..1046286 (-) 1230 WP_011681192.1 tetratricopeptide repeat protein -
  STT55_RS05515 (STT55_05475) - 1046276..1047454 (-) 1179 WP_011227264.1 AI-2E family transporter -
  STT55_RS05520 (STT55_05480) mutX 1047465..1047947 (-) 483 WP_011226072.1 8-oxo-dGTP diphosphatase Machinery gene
  STT55_RS05525 (STT55_05485) ftsX 1048103..1049032 (-) 930 WP_173940371.1 permease-like cell division protein FtsX -
  STT55_RS05530 (STT55_05490) ftsE 1049025..1049717 (-) 693 WP_022096763.1 cell division ATP-binding protein FtsE -
  STT55_RS05540 (STT55_05500) queG 1050956..1052074 (-) 1119 WP_084829636.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=449562 STT55_RS05520 WP_011226072.1 1047465..1047947(-) (mutX) [Streptococcus thermophilus strain ST55]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=449562 STT55_RS05520 WP_011226072.1 1047465..1047947(-) (mutX) [Streptococcus thermophilus strain ST55]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706