Detailed information NTG0044956

Bioinformatically predicted

Overview

• Name: comFC/cflB
• Type: Machinery gene
• Locus tag: GGS_RS11340
• Genome accession: NC_018712
• Coordinates: 1636328..1636993 (-)
• Length: 221 a.a.
• NCBI ID: WP_012767419.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis RE378
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1631328..1641993

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GGS_RS07960 (GGS_1511)	-	1632337..1632636 (-)	300	WP_000129105.1	hypothetical protein	-
GGS_RS07965	-	1633019..1633216 (-)	198	WP_000208122.1	helix-turn-helix transcriptional regulator	-
GGS_RS07970	-	1633213..1633398 (-)	186	WP_000938679.1	hypothetical protein	-
GGS_RS07975 (GGS_1512)	-	1633400..1634425 (-)	1026	WP_000822468.1	replication initiator protein A	-
GGS_RS11035	-	1634427..1634591 (-)	165	WP_000166480.1	hypothetical protein	-
GGS_RS07980 (GGS_1513)	-	1634698..1635141 (-)	444	WP_000447421.1	hypothetical protein	-
GGS_RS07985	-	1635407..1635664 (-)	258	WP_000191926.1	DUF3850 domain-containing protein	-
GGS_RS07990 (GGS_1514)	-	1635848..1636219 (-)	372	WP_001282475.1	hypothetical protein	-
GGS_RS11340 (GGS_1515)	comFC/cflB	1636328..1636993 (-)	666	WP_012767419.1	ComF family protein	Machinery gene
GGS_RS08000 (GGS_1516)	comFA/cflA	1636965..1638290 (-)	1326	WP_015017291.1	DEAD/DEAH box helicase	Machinery gene
GGS_RS08005 (GGS_1517)	-	1638346..1638984 (+)	639	WP_015017292.1	YigZ family protein	-
GGS_RS08010 (GGS_1518)	cysK	1639088..1640023 (+)	936	WP_003062335.1	cysteine synthase A	-
GGS_RS08015 (GGS_1519)	-	1640175..1640534 (-)	360	WP_015017293.1	S1 RNA-binding domain-containing protein	-
GGS_RS08020 (GGS_1520)	-	1640534..1641934 (-)	1401	WP_042357970.1	bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase	-

Sequence

Protein

• Length: 221 a.a.
• Molecular weight: 25364.39 Da
• Isoelectric Point: 8.7003

>NTDB_id=44956 GGS_RS11340 WP_012767419.1 1636328..1636993(-) (comFC/cflB) [Streptococcus dysgalactiae subsp. equisimilis RE378]
MICLLCQQFSPLPLRITDILFLKPQTTTLCQECQQGFQKISFTSCQTCNAPSQSSPCSDCLEWKVKGYEVNHKSLYQYNA
AMKAYFSQYKFQGDYLLRHVFAQELAQVIKKDYPDFTPVPVPISKERYEERHFNQVTAILEAGNINYCMLFKRMDTSRQS
SKTKNERLLSKDAYRLSTLSELPAKILIIDDIYTTGSTIIALKKLLMHVGNSDIKSLSIAR

Nucleotide

• Length: 666 bp

>NTDB_id=44956 GGS_RS11340 WP_012767419.1 1636328..1636993(-) (comFC/cflB) [Streptococcus dysgalactiae subsp. equisimilis RE378]
ATGATATGCCTCCTATGTCAACAATTTAGTCCATTACCCTTGCGAATAACGGATATTCTCTTTTTGAAACCTCAAACAAC
AACTCTCTGTCAGGAGTGTCAACAAGGGTTTCAAAAGATAAGCTTCACGAGTTGCCAAACCTGTAACGCTCCTTCCCAAA
GCTCTCCATGTTCTGATTGTTTAGAATGGAAAGTCAAAGGATACGAGGTTAATCACAAAAGTTTATATCAGTATAACGCT
GCTATGAAAGCTTATTTTAGCCAATATAAGTTTCAAGGAGACTACTTGCTAAGACATGTCTTTGCTCAAGAATTAGCCCA
AGTTATTAAAAAAGACTATCCAGATTTTACTCCTGTTCCAGTTCCTATCAGTAAGGAGCGTTATGAAGAACGTCATTTCA
ATCAAGTGACTGCTATACTTGAAGCAGGGAATATTAACTATTGCATGCTTTTTAAAAGAATGGATACTAGCCGTCAGTCT
TCTAAAACTAAAAATGAAAGATTATTATCCAAAGATGCCTATCGTCTCTCCACCCTCTCTGAATTACCAGCAAAAATCCT
CATTATTGATGATATTTACACTACCGGTAGCACCATTATCGCTTTGAAAAAACTATTAATGCATGTTGGAAATAGTGACA
TCAAAAGTTTGTCAATTGCACGGTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC/cflB	Streptococcus mitis NCTC 12261	41.629	100	0.416
comFC/cflB	Streptococcus mitis SK321	41.176	100	0.412
comFC/cflB	Streptococcus pneumoniae TIGR4	40.724	100	0.407
comFC/cflB	Streptococcus pneumoniae Rx1	40.271	100	0.403
comFC/cflB	Streptococcus pneumoniae D39	40.271	100	0.403
comFC/cflB	Streptococcus pneumoniae R6	40.271	100	0.403