Detailed information NTG0044916

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: GGS_RS06920
• Genome accession: NC_018712
• Coordinates: 1408559..1409521 (-)
• Length: 320 a.a.
• NCBI ID: WP_003056374.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis RE378
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1403559..1414521

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GGS_RS06900 (GGS_1308)	-	1404717..1405340 (-)	624	WP_003055586.1	HAD-IA family hydrolase	-
GGS_RS06905 (GGS_1309)	-	1405340..1405882 (-)	543	WP_003055595.1	GNAT family N-acetyltransferase	-
GGS_RS06910 (GGS_1310)	-	1406012..1406560 (-)	549	WP_042357954.1	NADPH-dependent FMN reductase	-
GGS_RS06915 (GGS_1311)	pepF	1406746..1408548 (-)	1803	WP_015017196.1	oligoendopeptidase F	Regulator
GGS_RS06920 (GGS_1312)	coiA	1408559..1409521 (-)	963	WP_003056374.1	competence protein CoiA family protein	Machinery gene
GGS_RS06925 (GGS_1313)	-	1409633..1410793 (-)	1161	WP_015017197.1	MFS transporter	-
GGS_RS06930 (GGS_1314)	-	1410885..1411601 (-)	717	WP_015017198.1	pseudouridine synthase	-
GGS_RS06935 (GGS_1315)	nagB	1411705..1412418 (-)	714	WP_003056370.1	glucosamine-6-phosphate deaminase	-
GGS_RS06940 (GGS_1316)	queA	1412616..1413644 (+)	1029	WP_015017199.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 37699.12 Da
• Isoelectric Point: 10.1798

>NTDB_id=44916 GGS_RS06920 WP_003056374.1 1408559..1409521(-) (coiA) [Streptococcus dysgalactiae subsp. equisimilis RE378]
MLRVLTALTNENQVISLLVQPNPQKQPFRCPACGSPVRLRQGKIIRPHFAHITLANCHFQTENESQEHLHLKAKIYTSLI
KTEKVCVEKYLPELQQFPDLWVNDKLALEIQCSPIPIERLVARTQAYQKHGYEVRWLLGKKLWLKNRLTAFQKQCLYFSS
RLGFHLWELDTAAHLLRLKYLIHEDLFDKVSYLTKTISLDNNIMESLRIPYHQSKLCSYQKPMAKSLSIPIQRALLAKHP
KWLRRQERAYLAGYNLLMLPVEAFYPQWRPVQSATGFCQIKENLHDYNKSFKAYYKKEGNKKVQTLFSPQYYVKIVSNRK

Nucleotide

• Length: 963 bp

>NTDB_id=44916 GGS_RS06920 WP_003056374.1 1408559..1409521(-) (coiA) [Streptococcus dysgalactiae subsp. equisimilis RE378]
GTGTTGAGAGTATTAACAGCTTTAACCAATGAGAATCAGGTGATTTCTTTGCTAGTACAGCCTAATCCTCAGAAGCAACC
ATTTCGTTGTCCAGCTTGCGGATCTCCTGTTCGCTTGCGTCAGGGAAAAATTATACGCCCTCATTTTGCACACATCACAT
TAGCTAATTGTCATTTTCAAACAGAAAATGAGTCCCAAGAACATTTGCATTTGAAAGCAAAAATATACACAAGTCTGATA
AAAACAGAAAAGGTTTGTGTGGAAAAGTATCTTCCCGAGTTACAACAATTTCCAGATCTTTGGGTGAATGATAAGTTAGC
CTTAGAAATTCAGTGCAGCCCTATACCAATTGAGCGTTTGGTGGCACGTACACAAGCCTATCAGAAACATGGTTACGAGG
TTCGTTGGCTGTTGGGAAAGAAACTCTGGCTTAAAAATCGTTTAACGGCCTTCCAAAAACAATGTCTTTACTTTTCGTCT
CGTTTAGGCTTTCATTTGTGGGAGTTGGATACAGCTGCACATCTGTTGCGTCTAAAATACTTAATTCATGAAGATTTATT
TGACAAAGTGAGTTACCTAACCAAAACCATTTCTTTGGATAACAATATCATGGAAAGTTTGCGGATTCCTTATCACCAAA
GCAAGCTCTGTTCTTACCAAAAACCTATGGCCAAGTCTCTTTCGATACCCATTCAAAGGGCTTTATTAGCGAAGCACCCT
AAATGGTTACGTCGTCAGGAAAGAGCCTATTTAGCTGGCTATAATTTACTCATGTTGCCAGTAGAGGCCTTCTATCCTCA
ATGGCGTCCCGTACAGTCGGCTACTGGTTTTTGTCAAATCAAAGAGAATCTCCATGATTATAATAAGAGTTTTAAAGCTT
ATTACAAAAAAGAAGGGAATAAGAAGGTGCAAACGCTTTTTTCACCTCAATATTATGTTAAAATAGTTAGTAATAGAAAA
TGA

Domains

Predicted by InterProScan.

• Competence protein CoiA-like family (CoiA_nuc) (19-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	42.581	96.875	0.413
coiA	Streptococcus pneumoniae Rx1	40.968	96.875	0.397
coiA	Streptococcus pneumoniae D39	40.968	96.875	0.397
coiA	Streptococcus pneumoniae R6	40.968	96.875	0.397
coiA	Streptococcus pneumoniae TIGR4	40.968	96.875	0.397
coiA	Lactococcus lactis subsp. cremoris KW2	38.037	100	0.388