Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | GE021_RS00850 | Genome accession | NZ_CP053792 |
| Coordinates | 145121..146074 (+) | Length | 317 a.a. |
| NCBI ID | WP_125073624.1 | Uniprot ID | A0A3P5XZA1 |
| Organism | Streptococcus canis strain HL_77_1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 140121..151074
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GE021_RS00810 (GE021_000810) | - | 140947..141312 (+) | 366 | WP_125073632.1 | DUF1033 family protein | - |
| GE021_RS00815 (GE021_000815) | comYA | 141399..142340 (+) | 942 | WP_125073631.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GE021_RS00820 (GE021_000820) | comYB | 142273..143307 (+) | 1035 | WP_172774157.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| GE021_RS00825 (GE021_000825) | comYC | 143310..143636 (+) | 327 | WP_125073629.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GE021_RS00830 (GE021_000830) | comGD | 143611..144039 (+) | 429 | WP_260436826.1 | competence type IV pilus minor pilin ComGD | - |
| GE021_RS00835 (GE021_000835) | comGE | 144017..144292 (+) | 276 | WP_125073627.1 | competence type IV pilus minor pilin ComGE | - |
| GE021_RS00840 (GE021_000840) | comYF | 144273..144713 (+) | 441 | WP_125073626.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| GE021_RS00845 (GE021_000845) | comGG | 144691..145071 (+) | 381 | WP_125073625.1 | competence type IV pilus minor pilin ComGG | - |
| GE021_RS00850 (GE021_000850) | comYH | 145121..146074 (+) | 954 | WP_125073624.1 | class I SAM-dependent methyltransferase | Machinery gene |
| GE021_RS00855 (GE021_000855) | - | 146133..147329 (+) | 1197 | WP_093998734.1 | acetate kinase | - |
| GE021_RS00860 (GE021_000860) | - | 147649..147855 (+) | 207 | WP_125073623.1 | helix-turn-helix transcriptional regulator | - |
| GE021_RS11180 | - | 148013..148450 (+) | 438 | WP_164406320.1 | hypothetical protein | - |
| GE021_RS00870 (GE021_000870) | proC | 148599..149369 (-) | 771 | WP_125073622.1 | pyrroline-5-carboxylate reductase | - |
| GE021_RS00875 (GE021_000875) | pepA | 149417..150484 (-) | 1068 | WP_125073621.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35884.00 Da Isoelectric Point: 4.7866
>NTDB_id=447251 GE021_RS00850 WP_125073624.1 145121..146074(+) (comYH) [Streptococcus canis strain HL_77_1]
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNIDKLKALCLTKEEWRRAYQFIFIKAAQT
EPLQANHQFTPDTIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEVMDSS
AHFIQEDAVRPQLLKESDVVISDLPVGYYPNDAIAKRYKVASSDEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKHWLKGYAQVVALITLPDTIFGHPSNAKSIIVLQKQTDRPMETFVYPIRDLKLAENIHALMDNFKKWKLDNVN
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNIDKLKALCLTKEEWRRAYQFIFIKAAQT
EPLQANHQFTPDTIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEVMDSS
AHFIQEDAVRPQLLKESDVVISDLPVGYYPNDAIAKRYKVASSDEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKHWLKGYAQVVALITLPDTIFGHPSNAKSIIVLQKQTDRPMETFVYPIRDLKLAENIHALMDNFKKWKLDNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=447251 GE021_RS00850 WP_125073624.1 145121..146074(+) (comYH) [Streptococcus canis strain HL_77_1]
ATGAATTTTGAAAAAATTGAAGAAGCTTATCAGTTGCTTTTAGAGAACAGCCAACTGATTGAAAATGATTTAAAAACCCA
TATTTATGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCAGAGGGAGCCAGTCCTCAGGTGGCTCAAAACATTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGCAGAGCCTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAACCACTGCAAGCTAACCATCAGTTCACACCAGATACTATTGGTTTTATTCTTCTCTATCTGTTGGAACAATTGAGCGA
TAAAGATAGCTTAGAGGTGCTTGAAATTGGAAGTGGAACAGGGAACCTAGCTCAAACCCTTCTCAACAACACGAGCAAGT
CTCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATTTGTCAGCCAGCATTGCAGAGGTGATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCAGTAAGGCCTCAATTATTGAAAGAAAGTGATGTTGTCATCAGTGACTTGCCAGTTGG
CTATTATCCTAACGATGCTATTGCCAAACGTTACAAGGTGGCTAGTTCAGATGAGCATACGTATGCTCACCATTTATTAA
TGGAACAGTCTCTAAAATACTTGAAAAAAGATGGCTTTGCTATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACATTGGTTAAAAGGATATGCTCAGGTGGTGGCTCTAATTACTCTACCAGACACCATTTTTGGTCA
TCCATCTAATGCCAAGTCTATTATTGTCTTGCAAAAACAAACAGACCGCCCAATGGAAACCTTTGTTTATCCAATTCGGG
ACTTGAAACTTGCAGAGAATATTCATGCTCTTATGGATAATTTCAAAAAGTGGAAACTGGATAATGTCAATTAA
ATGAATTTTGAAAAAATTGAAGAAGCTTATCAGTTGCTTTTAGAGAACAGCCAACTGATTGAAAATGATTTAAAAACCCA
TATTTATGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCAGAGGGAGCCAGTCCTCAGGTGGCTCAAAACATTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGCAGAGCCTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAACCACTGCAAGCTAACCATCAGTTCACACCAGATACTATTGGTTTTATTCTTCTCTATCTGTTGGAACAATTGAGCGA
TAAAGATAGCTTAGAGGTGCTTGAAATTGGAAGTGGAACAGGGAACCTAGCTCAAACCCTTCTCAACAACACGAGCAAGT
CTCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATTTGTCAGCCAGCATTGCAGAGGTGATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCAGTAAGGCCTCAATTATTGAAAGAAAGTGATGTTGTCATCAGTGACTTGCCAGTTGG
CTATTATCCTAACGATGCTATTGCCAAACGTTACAAGGTGGCTAGTTCAGATGAGCATACGTATGCTCACCATTTATTAA
TGGAACAGTCTCTAAAATACTTGAAAAAAGATGGCTTTGCTATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACATTGGTTAAAAGGATATGCTCAGGTGGTGGCTCTAATTACTCTACCAGACACCATTTTTGGTCA
TCCATCTAATGCCAAGTCTATTATTGTCTTGCAAAAACAAACAGACCGCCCAATGGAAACCTTTGTTTATCCAATTCGGG
ACTTGAAACTTGCAGAGAATATTCATGCTCTTATGGATAATTTCAAAAAGTGGAAACTGGATAATGTCAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
66.456 |
99.685 |
0.662 |
| comYH | Streptococcus mutans UA159 |
66.139 |
99.685 |
0.659 |