Detailed information NTG0446048

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: HPE59_RS05565
• Genome accession: NZ_CP053659
• Coordinates: 1081915..1082874 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain 2016-IZSVE-19-111250
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1076915..1087874

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPE59_RS05540 (HPE59_05545)	neuC	1077481..1078596 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
HPE59_RS08985 (HPE59_05550)	-	1078593..1079507 (+)	915	Protein_1084	beta-1,4-N-acetylgalactosaminyltransferase	-
HPE59_RS08990 (HPE59_05555)	-	1079541..1080203 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
HPE59_RS05555 (HPE59_05560)	-	1080198..1081048 (-)	851	Protein_1086	glycosyltransferase	-
HPE59_RS05560 (HPE59_05565)	waaV	1081032..1081856 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
HPE59_RS05565 (HPE59_05570)	waaF	1081915..1082874 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
HPE59_RS05570 (HPE59_05575)	gmhA	1082855..1083415 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
HPE59_RS05575 (HPE59_05580)	rfaE1	1083412..1084797 (-)	1386	WP_002890180.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
HPE59_RS05580 (HPE59_05585)	rfaD	1084790..1085743 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
HPE59_RS05585 (HPE59_05590)	gmhB	1085744..1086304 (-)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
HPE59_RS05590 (HPE59_05595)	-	1086386..1086688 (+)	303	WP_002852762.1	cytochrome c	-
HPE59_RS05595 (HPE59_05600)	ccoS	1086711..1086917 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=446048 HPE59_RS05565 WP_002875425.1 1081915..1082874(+) (waaF) [Campylobacter jejuni strain 2016-IZSVE-19-111250]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=446048 HPE59_RS05565 WP_002875425.1 1081915..1082874(+) (waaF) [Campylobacter jejuni strain 2016-IZSVE-19-111250]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1