Detailed information NTG0445076

Bioinformatically predicted

Overview

• Name: cqsS
• Type: Regulator
• Locus tag: HOO69_RS20050
• Genome accession: NZ_CP053543
• Coordinates: 713255..715309 (+)
• Length: 684 a.a.
• NCBI ID: WP_171802951.1
• Uniprot ID: A0AAE7AYF8
• Organism: Vibrio europaeus strain NPI-1
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 708255..720309

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HOO69_RS20040 (HOO69_20095)	-	708872..710002 (+)	1131	WP_171802949.1	exonuclease SbcCD subunit D	-
HOO69_RS20045 (HOO69_20100)	-	710011..713058 (+)	3048	WP_171802950.1	SbcC/MukB-like Walker B domain-containing protein	-
HOO69_RS20050 (HOO69_20105)	cqsS	713255..715309 (+)	2055	WP_171802951.1	hybrid sensor histidine kinase/response regulator	Regulator
HOO69_RS20055 (HOO69_20110)	cqsA	715365..716546 (-)	1182	WP_069668172.1	alpha-hydroxyketone-type quorum-sensing autoinducer synthase	Regulator
HOO69_RS20060 (HOO69_20115)	-	716756..717727 (-)	972	WP_171802952.1	TDT family transporter	-
HOO69_RS20065 (HOO69_20120)	clcA	717845..719245 (-)	1401	WP_171802953.1	H(+)/Cl(-) exchange transporter ClcA	-

Sequence

Protein

• Length: 684 a.a.
• Molecular weight: 78687.77 Da
• Isoelectric Point: 5.4489

>NTDB_id=445076 HOO69_RS20050 WP_171802951.1 713255..715309(+) (cqsS) [Vibrio europaeus strain NPI-1]
MNVVKKIYQYADPNLELVGWMGFFGFPAYFYIWSYMYPQPYENAPLRFFCALLLLGLALRKYTPPPLKRYLPYYYLVTIT
ICLPFFFSFMMFMNEWSTVWAMSFMSSIFLHVLLVHETRVMLLQAMIAIVAAYLFSYGLEHAPAKVETEVVVIWPYIPIF
LFTYVFGNLFYFRNQVEHESKVSIAKSFGAGIAHEMRNPLSALKASVDVLDSSLPSIKTIKGDKAEIDKLDIERMKEVLS
GADEVIRNGNEAIDLLLTSIDQSRVSHSTFRSYSVEKIARESLASFSYPSDHAKQVVNLHVESDFDYFGSDTLLKYALYN
LLKNSLYYQNGEEFKIAITIRSDHEFNYLYFEDNGIGIEKDKLEFVFKDFYTSGKSSSYGLGLPFCKRVMHAFGGRIKCE
SVLGEWTRFTLKFPRYESQKVTSIKQDILRTKSMLYVGDDVAVKRKLNEFTFYTGALCDVVDFEQARAKEEFEFEYDLIL
LDLETCSEQEYLMLESKLHFTEAKIVMLFAHDGQYHNRFSRFLTFYPKEKAQFLLDVTQSVDSLMFGNVEPNRNLIPKKA
PAVVGKRILIADDNESMRQLTTILLNKQGYQVSQAGDGNEVLSVLSSEQVDLILMDLEMPMLDGLETTTLIRESEEVYAN
VPILGHTGDNRKETLTKIDQAGMNGYLIKPVDKVKLLDKVADYI

Nucleotide

• Length: 2055 bp

>NTDB_id=445076 HOO69_RS20050 WP_171802951.1 713255..715309(+) (cqsS) [Vibrio europaeus strain NPI-1]
ATGAATGTAGTAAAGAAGATTTATCAGTACGCAGATCCCAACCTTGAGTTAGTCGGGTGGATGGGATTCTTCGGCTTTCC
AGCATACTTCTACATTTGGTCGTACATGTACCCGCAGCCCTATGAAAATGCGCCGTTAAGGTTTTTTTGCGCTTTGCTCC
TATTAGGGCTCGCGTTAAGAAAATATACGCCTCCTCCACTGAAACGATATCTGCCTTATTACTACTTGGTGACAATCACC
ATCTGCTTACCGTTCTTTTTCTCGTTTATGATGTTTATGAATGAATGGTCGACAGTATGGGCAATGTCCTTCATGTCTTC
GATCTTTCTTCATGTGTTATTAGTCCATGAGACTCGTGTCATGTTGCTGCAGGCGATGATTGCCATCGTAGCGGCCTACT
TGTTTAGCTATGGATTAGAACACGCGCCTGCCAAAGTCGAGACAGAAGTGGTCGTGATTTGGCCTTACATCCCAATTTTC
TTGTTTACTTATGTCTTTGGTAACTTGTTCTATTTCCGTAACCAAGTAGAGCATGAGTCGAAAGTCTCAATTGCCAAGTC
ATTTGGCGCGGGTATCGCTCATGAAATGCGCAATCCGTTAAGCGCACTTAAAGCATCCGTAGACGTTCTCGACTCGTCTT
TACCTTCTATCAAGACGATTAAAGGAGACAAAGCAGAGATCGATAAGCTGGATATCGAGCGCATGAAAGAAGTGCTTTCA
GGAGCTGATGAAGTCATACGCAATGGTAACGAAGCGATAGACTTATTGCTTACCTCCATTGACCAGAGCCGAGTATCACA
CTCAACGTTTCGGTCTTATTCTGTCGAGAAGATCGCCAGAGAGTCGTTGGCAAGTTTCTCTTATCCTAGCGATCACGCCA
AACAAGTGGTGAATTTACATGTCGAAAGTGACTTTGACTATTTTGGTAGCGATACGTTATTGAAGTATGCGCTGTACAAT
TTGCTAAAAAACTCACTCTATTACCAGAATGGTGAAGAGTTTAAGATTGCGATCACGATCAGGAGTGATCATGAGTTTAA
CTATCTCTACTTCGAAGACAACGGAATCGGGATAGAGAAAGATAAATTAGAGTTTGTCTTTAAAGATTTTTATACCTCAG
GAAAATCCTCAAGCTACGGGCTTGGATTGCCTTTTTGTAAACGTGTCATGCACGCTTTTGGCGGCAGAATAAAATGTGAG
TCGGTACTCGGAGAGTGGACGCGCTTTACCCTTAAATTTCCTCGCTATGAGTCCCAAAAAGTGACTTCAATCAAACAAGA
TATTCTAAGAACCAAATCAATGCTTTACGTTGGTGATGATGTGGCGGTCAAGCGCAAGTTAAACGAGTTTACTTTCTACA
CTGGGGCGCTGTGTGATGTGGTCGATTTTGAGCAGGCTAGGGCGAAGGAAGAGTTCGAATTTGAATACGATTTGATACTA
CTCGATCTAGAGACATGCAGTGAGCAAGAGTATCTAATGTTGGAGTCTAAGCTCCACTTTACTGAAGCAAAAATCGTGAT
GCTTTTTGCTCATGATGGTCAGTACCATAATCGATTCAGCCGATTCCTTACATTTTATCCAAAGGAGAAAGCGCAATTTC
TGCTTGATGTTACTCAGTCGGTTGATTCGCTTATGTTTGGTAACGTCGAACCTAATCGAAACCTTATTCCGAAAAAAGCA
CCTGCCGTGGTTGGTAAGCGTATCTTGATTGCCGATGACAATGAATCAATGAGGCAGTTAACCACTATCTTGCTTAACAA
ACAGGGCTACCAAGTTTCTCAGGCCGGAGATGGCAATGAGGTGTTGAGTGTTCTGAGCAGTGAACAGGTTGATTTGATTC
TGATGGACCTCGAAATGCCAATGTTGGATGGCTTAGAAACTACGACTCTTATTCGAGAGTCAGAAGAAGTCTACGCTAAC
GTGCCGATTCTTGGGCACACCGGTGATAATCGAAAAGAAACCCTCACTAAAATTGACCAAGCGGGTATGAATGGATACTT
AATTAAGCCTGTCGATAAAGTTAAATTACTTGATAAAGTAGCGGATTACATCTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (568-680)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (312-415)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cqsS	Vibrio cholerae strain A1552	49.419	100	0.497