Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   EYQ96_RS02835 Genome accession   NZ_CP053477
Coordinates   500201..500866 (+) Length   221 a.a.
NCBI ID   WP_107566263.1    Uniprot ID   A0A6N6V808
Organism   Staphylococcus warneri strain WB224     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 495201..505866
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EYQ96_RS02810 (EYQ96_02825) - 495770..496219 (+) 450 WP_023374230.1 MarR family winged helix-turn-helix transcriptional regulator -
  EYQ96_RS02815 (EYQ96_02830) - 496475..497947 (+) 1473 WP_114599525.1 poly-gamma-glutamate hydrolase family protein -
  EYQ96_RS02820 (EYQ96_02835) - 498127..498228 (+) 102 WP_015364644.1 SE2200 family small protein -
  EYQ96_RS02825 (EYQ96_02840) - 498311..499765 (-) 1455 WP_023374228.1 alkaline phosphatase -
  EYQ96_RS02830 (EYQ96_02845) - 500021..500179 (+) 159 WP_164967141.1 hypothetical protein -
  EYQ96_RS02835 (EYQ96_02850) braR 500201..500866 (+) 666 WP_107566263.1 response regulator transcription factor Regulator
  EYQ96_RS02840 (EYQ96_02855) braS 500872..501768 (+) 897 WP_023374225.1 HAMP domain-containing sensor histidine kinase Regulator
  EYQ96_RS02845 (EYQ96_02860) - 501872..502618 (+) 747 WP_023374224.1 ABC transporter ATP-binding protein -
  EYQ96_RS02850 (EYQ96_02865) - 502636..504630 (+) 1995 WP_023374223.1 FtsX-like permease family protein -
  EYQ96_RS02855 (EYQ96_02870) - 504753..505595 (+) 843 WP_023374222.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25417.46 Da        Isoelectric Point: 5.1410

>NTDB_id=444918 EYQ96_RS02835 WP_107566263.1 500201..500866(+) (braR) [Staphylococcus warneri strain WB224]
MKIYIVEDDLVIAESLASELKKWNYDVKMAKQFSHVLDDFKGYLPDLVLLDINLPTLNGFHWCQEMRKISNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKVQALLRRTYDLAVSNNELNVKGCKLIVDEAKLIFQDDATQLSLTELQIAK
LLFQNEGKFVNRTALIEKCWESENYIDDNTLAVNMTRLRKKLSQIGLTDFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=444918 EYQ96_RS02835 WP_107566263.1 500201..500866(+) (braR) [Staphylococcus warneri strain WB224]
ATGAAGATTTATATAGTAGAAGATGACTTAGTCATTGCAGAAAGTTTAGCAAGTGAACTTAAGAAATGGAACTATGACGT
TAAGATGGCAAAACAATTTTCGCATGTTTTAGATGATTTCAAAGGCTATCTACCTGACTTAGTACTACTAGATATTAATT
TACCTACTTTAAATGGATTCCATTGGTGCCAAGAAATGAGAAAAATCTCGAACGTACCTATTATATTTATTAGTTCAAGG
ACAGATAATATGGACCAAATTATGGCGATTCAAATGGGTGGCGATGATTTTATTGAGAAACCATTCAATTTATCATTAAC
AGTTGCTAAAGTACAAGCTTTATTACGACGAACTTATGATTTAGCTGTATCTAACAACGAATTAAATGTTAAAGGATGTA
AACTTATCGTTGATGAGGCTAAATTAATATTTCAAGATGATGCGACACAACTATCTTTAACAGAACTTCAAATCGCTAAA
TTGTTGTTTCAAAATGAAGGTAAATTTGTAAATCGAACAGCTTTAATTGAAAAATGTTGGGAATCAGAGAATTATATTGA
TGATAATACTTTGGCGGTAAATATGACACGATTGCGAAAAAAATTAAGTCAAATTGGCTTAACAGATTTTATTGAAACGA
AGAAAAATGTGGGTTATAGGGTGTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N6V808

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

78.733

100

0.787