Detailed information    

insolico Bioinformatically predicted

Overview

Name   cqsA   Type   Regulator
Locus tag   IUJ54_RS12990 Genome accession   NZ_CP064378
Coordinates   2927118..2928368 (-) Length   416 a.a.
NCBI ID   WP_010948429.1    Uniprot ID   Q5ZRZ0
Organism   Legionella pneumophila subsp. pneumophila strain PartS-Lpneumophila-RM8376     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2922118..2933368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IUJ54_RS12970 (IUJ54_12940) hemC 2922468..2923397 (-) 930 WP_027223811.1 hydroxymethylbilane synthase -
  IUJ54_RS12975 (IUJ54_12945) - 2923789..2925078 (+) 1290 WP_010948432.1 HAMP domain-containing sensor histidine kinase -
  IUJ54_RS12980 (IUJ54_12950) - 2925166..2925729 (-) 564 WP_010948431.1 HdeD family acid-resistance protein -
  IUJ54_RS12985 (IUJ54_12955) - 2926011..2927036 (+) 1026 WP_010948430.1 response regulator -
  IUJ54_RS12990 (IUJ54_12960) cqsA 2927118..2928368 (-) 1251 WP_010948429.1 quorum-sensing autoinducer LAI-1 synthase LqsA Regulator
  IUJ54_RS12995 (IUJ54_12965) - 2928557..2928985 (+) 429 WP_014842763.1 c-type cytochrome -
  IUJ54_RS13000 (IUJ54_12970) - 2928982..2929473 (+) 492 WP_016357035.1 disulfide bond formation protein B -
  IUJ54_RS13005 (IUJ54_12975) tgt 2929535..2930686 (+) 1152 WP_014842761.1 tRNA guanosine(34) transglycosylase Tgt -
  IUJ54_RS13010 (IUJ54_12980) - 2930713..2931207 (+) 495 WP_010948425.1 peptidylprolyl isomerase -
  IUJ54_RS13015 (IUJ54_12985) - 2931415..2932044 (-) 630 WP_010948424.1 trimeric intracellular cation channel family protein -
  IUJ54_RS13020 (IUJ54_12990) - 2932161..2932505 (+) 345 WP_010948423.1 hypothetical protein -
  IUJ54_RS13025 (IUJ54_12995) - 2932758..2933057 (+) 300 WP_010948422.1 metalloregulator ArsR/SmtB family transcription factor -

Sequence

Protein


Download         Length: 416 a.a.        Molecular weight: 46124.69 Da        Isoelectric Point: 9.2711

>NTDB_id=443355 IUJ54_RS12990 WP_010948429.1 2927118..2928368(-) (cqsA) [Legionella pneumophila subsp. pneumophila strain PartS-Lpneumophila-RM8376]
MSNTEYQTIDNKTQYINGKEKHQNHAYPEYINHSMEKYYEGRVNKSWQGKHILKGKTPTANSLIFSSNDYLNISQHPQLI
KAQIAAMQKYGNGQMQSAVFLNNSSFLLSQCEKKFSSFLNYSAALLTQSGWSANVGLIQTLAKYNTPVYLDFYAHMSFWS
GVKAARAKSIPFLHNSVDSLKKRIEHHGPGIIAVDSIYSTLGTISPLADYADIARKFKCLLIVDESHSLGTHGSQGKGMV
AKLGLSSQIDIITASLAKALSGRGGIITGDRQLIEYIRYSSLPSIFSSALMPHDLAGFSASLEIITQEEWRRAKLQTNAD
FLREALSCEGINIGSSGSQIVPLVTGSEANTLWLRDELEKEDIFGAVFCSPATPKNKCLIRLSISAHHEKSDLLRVIECL
VRLARKRPDIPLFKGN

Nucleotide


Download         Length: 1251 bp        

>NTDB_id=443355 IUJ54_RS12990 WP_010948429.1 2927118..2928368(-) (cqsA) [Legionella pneumophila subsp. pneumophila strain PartS-Lpneumophila-RM8376]
ATGAGCAATACAGAATACCAAACAATTGATAACAAGACTCAATATATCAATGGAAAAGAAAAACATCAAAACCATGCTTA
TCCTGAGTACATCAATCATTCCATGGAAAAATATTACGAGGGACGAGTCAATAAATCCTGGCAAGGGAAACACATACTTA
AAGGCAAAACCCCGACTGCAAATTCACTGATTTTTTCGAGCAATGATTATTTAAACATCAGTCAACATCCGCAATTAATT
AAAGCGCAAATTGCTGCGATGCAAAAATATGGTAATGGTCAAATGCAATCTGCTGTATTTTTAAATAACAGCTCTTTTTT
GCTCAGCCAATGTGAAAAGAAATTCAGTTCCTTTTTAAATTATTCTGCGGCCCTGCTCACTCAATCAGGCTGGAGCGCTA
ACGTTGGTCTCATACAAACCCTGGCCAAGTACAATACACCAGTGTATCTGGATTTTTATGCCCATATGTCTTTTTGGTCT
GGTGTAAAAGCAGCAAGAGCCAAATCTATACCGTTTCTACATAATTCAGTCGATTCACTAAAAAAACGAATTGAGCACCA
TGGGCCAGGAATAATTGCAGTAGATTCTATTTATAGTACGCTGGGTACGATTAGTCCATTGGCTGACTATGCTGACATTG
CAAGAAAATTCAAATGTTTGCTCATCGTCGATGAATCTCATTCATTAGGTACGCATGGTTCGCAAGGCAAGGGGATGGTG
GCTAAACTGGGATTATCAAGCCAAATAGACATCATAACAGCAAGCCTGGCTAAAGCCTTATCAGGACGGGGAGGCATCAT
TACAGGAGATAGGCAACTTATAGAATATATCAGATATTCATCTCTACCCTCTATTTTTAGTTCTGCTTTAATGCCTCATG
ATTTAGCAGGATTTAGCGCATCATTAGAAATTATTACTCAAGAAGAATGGAGAAGAGCAAAATTACAAACCAATGCTGAT
TTTTTACGAGAAGCCTTATCATGCGAAGGAATTAATATAGGAAGTAGTGGCTCTCAAATAGTCCCTTTAGTTACAGGCAG
CGAGGCTAACACGCTTTGGTTAAGGGATGAGCTAGAAAAAGAAGACATCTTTGGAGCCGTGTTCTGTTCACCCGCCACTC
CCAAAAATAAATGCCTGATTCGTTTATCCATCAGCGCGCATCACGAAAAATCGGACTTGCTCAGAGTGATTGAGTGCCTG
GTCAGACTTGCAAGAAAAAGACCCGATATTCCTTTGTTTAAGGGTAATTAA

Domains

Predicted by InterProScan.

Aminotransferase class I and II (Aminotran_1_2)

(63-398)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5ZRZ0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cqsA Vibrio cholerae strain A1552

45.43

89.423

0.406