Detailed information NTG0442254

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: IRJ28_RS16955
• Genome accession: NZ_CP064096
• Coordinates: 3209346..3210494 (-)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: P94415
• Organism: Bacillus subtilis strain N1142-3at
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3204346..3215494

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IRJ28_RS16925	yclO	3205063..3206010 (-)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-
IRJ28_RS16930	ceuB	3206003..3206953 (-)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
IRJ28_RS16935	thrD	3207338..3208702 (+)	1365	WP_003234493.1	aspartate kinase	-
IRJ28_RS16940	yczN	3208856..3208969 (+)	114	WP_003234495.1	YjcZ family sporulation protein	-
IRJ28_RS16945	yczM	3209051..3209140 (+)	90	WP_015482794.1	YjcZ family sporulation protein	-
IRJ28_RS16950	phrC	3209240..3209362 (-)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
IRJ28_RS16955	rapC	3209346..3210494 (-)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
IRJ28_RS16960	yclK	3210657..3212078 (-)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
IRJ28_RS16965	yclJ	3212065..3212748 (-)	684	WP_003246532.1	two-component system response regulator YclJ	-
IRJ28_RS16970	yclI	3212961..3214421 (+)	1461	WP_003234506.1	ABC transporter permease	-
IRJ28_RS16975	yclH	3214437..3215117 (+)	681	WP_003234507.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=442254 IRJ28_RS16955 WP_003246686.1 3209346..3210494(-) (rapC) [Bacillus subtilis strain N1142-3at]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=442254 IRJ28_RS16955 WP_003246686.1 3209346..3210494(-) (rapC) [Bacillus subtilis strain N1142-3at]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

3D structure

• AlphaFold DB: P94415

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571