Detailed information NTG0441252

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: HIN87_RS14925
• Genome accession: NZ_CP051869
• Coordinates: 3075626..3076327 (+)
• Length: 233 a.a.
• NCBI ID: WP_032000520.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain Ab-D10a-a
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3070626..3081327

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HIN87_RS14890 (HIN87_14890)	kdsB	3071149..3071910 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
HIN87_RS14895 (HIN87_14895)	-	3071922..3072902 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
HIN87_RS14900 (HIN87_14900)	-	3072914..3073255 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
HIN87_RS14905 (HIN87_14905)	-	3073273..3074046 (+)	774	WP_000497298.1	TatD family hydrolase	-
HIN87_RS14910 (HIN87_14910)	-	3074084..3074692 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
HIN87_RS14915 (HIN87_14915)	-	3074702..3075256 (+)	555	WP_000841373.1	type II secretion system protein	-
HIN87_RS14920 (HIN87_14920)	xcpV	3075246..3075626 (+)	381	WP_000836907.1	type II secretion system minor pseudopilin GspI	Machinery gene
HIN87_RS14925 (HIN87_14925)	xcpW	3075626..3076327 (+)	702	WP_032000520.1	type II secretion system minor pseudopilin GspJ	Machinery gene
HIN87_RS14930 (HIN87_14930)	gspK	3076327..3077286 (+)	960	WP_032000521.1	type II secretion system minor pseudopilin GspK	-
HIN87_RS14935 (HIN87_14935)	-	3077516..3078112 (+)	597	WP_032000522.1	6-pyruvoyl trahydropterin synthase family protein	-
HIN87_RS14940 (HIN87_14940)	ung	3078163..3078876 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
HIN87_RS14945 (HIN87_14945)	-	3078873..3079997 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
HIN87_RS14950 (HIN87_14950)	tadA	3080004..3080507 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
HIN87_RS14955 (HIN87_14955)	-	3080577..3081020 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26601.53 Da
• Isoelectric Point: 9.5501

>NTDB_id=441252 HIN87_RS14925 WP_032000520.1 3075626..3076327(+) (xcpW) [Acinetobacter baumannii strain Ab-D10a-a]
MIKNKYIHIRSFASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEATKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=441252 HIN87_RS14925 WP_032000520.1 3075626..3076327(+) (xcpW) [Acinetobacter baumannii strain Ab-D10a-a]
ATGATAAAAAATAAATATATTCACATCCGCAGCTTTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGCCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991