Detailed information NTG0439622

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HG578_RS01650
• Genome accession: NZ_CP051537
• Coordinates: 345851..346651 (+)
• Length: 266 a.a.
• NCBI ID: WP_202134949.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain LIM-005
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 340851..351651

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG578_RS01615 (HG578_01615)	pseH	341351..341893 (+)	543	WP_202134943.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HG578_RS01620 (HG578_01620)	-	341826..342764 (-)	939	WP_202134944.1	tetraacyldisaccharide 4'-kinase	-
HG578_RS01625 (HG578_01625)	-	342761..343543 (-)	783	WP_202134945.1	NAD+ synthase	-
HG578_RS01635 (HG578_01635)	ilvC	343792..344784 (+)	993	WP_202134946.1	ketol-acid reductoisomerase	-
HG578_RS01640 (HG578_01640)	minD	344808..345614 (+)	807	WP_202134947.1	septum site-determining protein MinD	-
HG578_RS01645 (HG578_01645)	minE	345611..345844 (+)	234	WP_202134948.1	cell division topological specificity factor MinE	-
HG578_RS01650 (HG578_01650)	dprA	345851..346651 (+)	801	WP_202134949.1	DNA-processing protein DprA	Machinery gene
HG578_RS01655 (HG578_01655)	dprB	346648..347052 (+)	405	WP_202134950.1	Holliday junction resolvase RuvX	Machinery gene
HG578_RS01660 (HG578_01660)	-	347247..347765 (+)	519	WP_237393467.1	tetratricopeptide repeat protein	-
HG578_RS01665 (HG578_01665)	-	347881..348219 (+)	339	WP_000699902.1	hypothetical protein	-
HG578_RS01670 (HG578_01670)	-	348203..348763 (+)	561	WP_202134952.1	hypothetical protein	-
HG578_RS01675 (HG578_01675)	-	348863..349744 (-)	882	WP_202134953.1	RluA family pseudouridine synthase	-
HG578_RS01680 (HG578_01680)	recJ	349744..351294 (-)	1551	WP_202134954.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29835.78 Da
• Isoelectric Point: 8.5826

>NTDB_id=439622 HG578_RS01650 WP_202134949.1 345851..346651(+) (dprA) [Helicobacter pylori strain LIM-005]
MKSHFQYSALENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDVVIIPQADLKSG
SMSSARLAQKYQKPLFVLSQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=439622 HG578_RS01650 WP_202134949.1 345851..346651(+) (dprA) [Helicobacter pylori strain LIM-005]
ATGAAAAGCCACTTCCAATACAGCGCGCTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCTCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCGATCATAGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTGCCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATTTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCACAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGTAGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTGTTTGTTTTATCTCAGCGCTTAAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAATACCCTTTTAAAAGATT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCTAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAACTTTTAGAATACGAGCTTTTGGGTAAAATCAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.992	100	0.97
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.788	84.962	0.406