Detailed information NTG0438906

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: HGO96_RS04590
• Genome accession: NZ_CP051484
• Coordinates: 941886..942197 (-)
• Length: 103 a.a.
• NCBI ID: WP_054190026.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain NGA71
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 936886..947197

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HGO96_RS04555 (HGO96_07820)	gcvPA	937388..938734 (-)	1347	WP_054190021.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
HGO96_RS04560 (HGO96_07825)	gcvT	938754..939845 (-)	1092	WP_054190022.1	glycine cleavage system aminomethyltransferase GcvT	-
HGO96_RS04565 (HGO96_07830)	-	940004..940528 (-)	525	WP_054190023.1	shikimate kinase	-
HGO96_RS04570 (HGO96_07835)	-	940518..940664 (-)	147	WP_001789879.1	hypothetical protein	-
HGO96_RS04575 (HGO96_07840)	comGF	940761..941258 (-)	498	WP_077446653.1	competence type IV pilus minor pilin ComGF	Machinery gene
HGO96_RS04580 (HGO96_07845)	comGE	941176..941475 (-)	300	WP_054190024.1	hypothetical protein	Machinery gene
HGO96_RS04585 (HGO96_07850)	comGD	941462..941908 (-)	447	WP_077446655.1	competence type IV pilus minor pilin ComGD	Machinery gene
HGO96_RS04590 (HGO96_07855)	comGC	941886..942197 (-)	312	WP_054190026.1	competence type IV pilus major pilin ComGC	Machinery gene
HGO96_RS04595 (HGO96_07860)	comGB	942211..943281 (-)	1071	WP_054190027.1	competence type IV pilus assembly protein ComGB	Machinery gene
HGO96_RS04600 (HGO96_07865)	comGA	943253..944227 (-)	975	WP_054191886.1	competence type IV pilus ATPase ComGA	Machinery gene
HGO96_RS04605 (HGO96_07870)	-	944279..944902 (-)	624	WP_054190028.1	MBL fold metallo-hydrolase	-
HGO96_RS04610 (HGO96_07875)	-	944899..945228 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
HGO96_RS04615 (HGO96_07880)	-	945228..946214 (-)	987	WP_000161315.1	ROK family glucokinase	-
HGO96_RS04620 (HGO96_07885)	-	946211..946414 (-)	204	WP_000087561.1	YqgQ family protein	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11329.38 Da
• Isoelectric Point: 8.5268

>NTDB_id=438906 HGO96_RS04590 WP_054190026.1 941886..942197(-) (comGC) [Staphylococcus aureus strain NGA71]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIAEGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=438906 HGO96_RS04590 WP_054190026.1 941886..942197(-) (comGC) [Staphylococcus aureus strain NGA71]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGAGGGTTTCATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	99.029	100	0.99
comGC	Staphylococcus aureus N315	99.029	100	0.99
comGC/cglC	Streptococcus pneumoniae TIGR4	45.098	99.029	0.447
comGC/cglC	Streptococcus pneumoniae Rx1	45.098	99.029	0.447
comGC/cglC	Streptococcus pneumoniae D39	45.098	99.029	0.447
comGC/cglC	Streptococcus pneumoniae R6	45.098	99.029	0.447
comGC/cglC	Streptococcus mitis SK321	50	83.495	0.417
comGC/cglC	Streptococcus mitis NCTC 12261	50	83.495	0.417
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	42.857	88.35	0.379
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369