Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP   Type   Regulator
Locus tag   IL989_RS07705 Genome accession   NZ_CP062984
Coordinates   1553589..1555532 (+) Length   647 a.a.
NCBI ID   WP_193351772.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain PP19 isolate PP19     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context

Location: 1548589..1560532
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IL989_RS07680 (IL989_07680) def 1548963..1549445 (+) 483 WP_061573884.1 peptide deformylase -
  IL989_RS07685 (IL989_07685) fmt 1549450..1550403 (+) 954 WP_193351771.1 methionyl-tRNA formyltransferase -
  IL989_RS07690 (IL989_07690) rsmB 1550390..1551733 (+) 1344 WP_061573886.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  IL989_RS07695 (IL989_07695) rlmN 1551737..1552828 (+) 1092 WP_014470411.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  IL989_RS07700 (IL989_07700) - 1552834..1553595 (+) 762 WP_013352219.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  IL989_RS07705 (IL989_07705) stkP 1553589..1555532 (+) 1944 WP_193351772.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  IL989_RS07710 (IL989_07710) rsgA 1555547..1556437 (+) 891 WP_013352221.1 ribosome small subunit-dependent GTPase A -
  IL989_RS07715 (IL989_07715) rpe 1556439..1557092 (+) 654 WP_193351773.1 ribulose-phosphate 3-epimerase -
  IL989_RS07720 (IL989_07720) - 1557160..1557804 (+) 645 WP_193351774.1 thiamine diphosphokinase -
  IL989_RS07725 (IL989_07725) spoVM 1557891..1557971 (+) 81 WP_003154329.1 stage V sporulation protein SpoVM -
  IL989_RS07730 (IL989_07730) rpmB 1558048..1558236 (-) 189 WP_003154328.1 50S ribosomal protein L28 -
  IL989_RS07735 (IL989_07735) - 1558496..1558858 (+) 363 WP_065521305.1 Asp23/Gls24 family envelope stress response protein -

Sequence

Protein


Download         Length: 647 a.a.        Molecular weight: 71541.26 Da        Isoelectric Point: 5.0200

>NTDB_id=435929 IL989_RS07705 WP_193351772.1 1553589..1555532(+) (stkP) [Bacillus amyloliquefaciens strain PP19 isolate PP19]
MLTGKRISGRYHILRPIGGGGMANVFLAEDIILEREVAIKILRFDFVNDIDFIRRFRREAQSASSLDHPNIVSIYDIGEE
GDIYYIVMEYVEGMTLKEYITAHGPLHPKEALSVMEQIVSAIAHAHHNHIVHRDIKPHNILIDHLGHIKVTDFGIATALT
STTITHTNSVLGSVHYLSPEQARGGLATKKSDIYALGIVLFELLTGKMPFDGESAVSIALKHLQAETPSARKWNPSIPQS
VENIILKATAKDPFHRYESAEDMEADIRTAFDAGRLNEQKFSVQDDEEMTKAIPVITDGAIAALQAETPAETDDKEQPSA
KKKKRKWPWVLLAVCFIFIMAAVLAVTVFPSLFMPKEVSVPDVRGMKYEKAEALLEKNGLQADPDMTDIEDEKIEEGLMV
KTDPKAGSAVKEGSSVKLYKSIGKPKTQLIDVKGRPIDDAKKTLKDKGFKHVNVKEENDDSAAGTVIDQNPSAGTDMVVS
DDKVSLTVSLGPADVTLRDLKTYSKEAASGYLEDNGLQLVEKEAHSDDVPEGQVMKQEPAAGTAVKPGSDVEVTFSLGPE
EKPAKTVKEKISIPYEPEHEGDELEVQIAIDDKDHSISDTYDSFKIKEPTEKTIELKIDQGQKGYYQVMVDHKVVSYKTI
EYPKDND

Nucleotide


Download         Length: 1944 bp        

>NTDB_id=435929 IL989_RS07705 WP_193351772.1 1553589..1555532(+) (stkP) [Bacillus amyloliquefaciens strain PP19 isolate PP19]
GTGCTAACCGGCAAGCGGATCAGCGGGCGTTATCATATCCTCCGGCCCATTGGCGGCGGCGGAATGGCGAACGTTTTTTT
AGCTGAGGACATCATTCTCGAACGTGAAGTCGCAATTAAAATCCTGCGGTTTGACTTTGTGAATGACATTGATTTTATCA
GGCGTTTCAGAAGAGAAGCACAGTCGGCATCAAGCCTTGATCATCCGAATATCGTCAGTATTTACGATATCGGGGAGGAA
GGCGACATTTATTATATTGTCATGGAATATGTGGAAGGCATGACGTTAAAGGAATACATAACCGCACACGGACCGCTTCA
TCCGAAAGAAGCGCTGTCTGTTATGGAGCAGATCGTTTCAGCCATCGCCCATGCCCATCATAACCATATCGTGCACCGGG
ATATCAAACCGCACAATATTTTGATAGATCATTTAGGCCATATCAAGGTGACGGATTTCGGCATCGCCACAGCCCTCACT
TCGACGACAATTACACATACGAATTCTGTGCTCGGCTCGGTTCATTATTTGTCTCCGGAGCAGGCGAGAGGCGGTCTGGC
AACGAAAAAATCGGATATTTACGCGCTCGGCATCGTGCTGTTTGAGCTTTTAACAGGCAAAATGCCTTTTGACGGAGAAT
CAGCCGTCAGCATTGCGTTAAAGCATCTGCAAGCAGAAACGCCTTCCGCCAGAAAGTGGAACCCTTCCATTCCGCAGAGC
GTGGAAAACATTATTTTAAAGGCAACCGCCAAAGATCCGTTTCACCGCTATGAAAGCGCAGAGGACATGGAAGCGGACAT
CAGAACGGCTTTTGACGCCGGCAGGCTGAATGAACAAAAATTCTCCGTGCAGGATGATGAGGAAATGACGAAAGCGATTC
CCGTTATTACTGACGGTGCGATAGCCGCGCTTCAGGCGGAAACGCCGGCAGAGACGGATGATAAAGAACAGCCGTCCGCC
AAAAAGAAGAAACGGAAATGGCCGTGGGTTTTGCTGGCTGTCTGCTTTATTTTCATAATGGCGGCTGTTCTTGCAGTCAC
CGTGTTCCCGTCTTTGTTTATGCCCAAAGAGGTAAGCGTCCCCGATGTACGGGGCATGAAGTACGAAAAAGCGGAAGCCC
TGCTTGAAAAGAACGGCCTTCAAGCGGATCCTGATATGACGGACATTGAAGATGAAAAAATCGAAGAGGGATTAATGGTC
AAAACTGATCCGAAAGCGGGTTCTGCCGTTAAAGAAGGCTCTTCTGTAAAGCTGTACAAAAGCATCGGGAAACCGAAAAC
CCAGCTGATTGACGTGAAAGGCCGGCCGATCGATGATGCGAAAAAAACGCTTAAGGATAAAGGCTTCAAACATGTCAATG
TAAAAGAAGAGAACGATGACAGTGCGGCTGGCACCGTAATTGATCAGAACCCATCAGCCGGAACCGACATGGTCGTAAGC
GATGATAAAGTCAGCTTAACAGTCAGCCTCGGACCGGCGGACGTTACGCTGAGAGACTTAAAAACATACAGTAAAGAAGC
GGCTTCCGGGTATCTTGAAGATAACGGCCTGCAGCTTGTTGAAAAGGAAGCTCACTCAGATGACGTGCCTGAGGGACAGG
TCATGAAGCAAGAGCCGGCAGCCGGCACTGCGGTTAAGCCGGGAAGTGATGTTGAAGTAACGTTTTCGCTCGGGCCTGAA
GAAAAACCGGCGAAAACGGTAAAAGAAAAAATCAGCATCCCCTACGAACCCGAACATGAAGGGGACGAGCTCGAAGTGCA
AATCGCCATCGATGATAAAGACCACAGCATCTCTGATACGTATGACTCGTTTAAAATAAAAGAGCCGACTGAAAAAACAA
TTGAACTGAAGATTGATCAGGGACAGAAGGGGTATTATCAAGTGATGGTCGATCATAAAGTCGTCAGCTACAAAACGATT
GAATACCCGAAAGATAATGACTGA

Domains

Predicted by InterProScan.

PASTA domain (PASTA)

(495-556)

PASTA domain (PASTA)

(431-489)

PASTA domain (PASTA)

(358-419)

Protein kinase domain (Pkinase)

(11-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

38.799

95.209

0.369
  stkP Streptococcus pneumoniae D39

38.636

95.209

0.368
  stkP Streptococcus pneumoniae R6

38.636

95.209

0.368
  stkP Streptococcus pneumoniae Rx1

38.474

95.209

0.366