Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   CVT01_RS08770 Genome accession   NZ_CP049266
Coordinates   1783032..1784129 (+) Length   365 a.a.
NCBI ID   WP_021085361.1    Uniprot ID   A0A0M4TCP9
Organism   Campylobacter concisus strain P1CDO3     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1778032..1789129
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CVT01_RS08735 (CVT01_08740) - 1778555..1778788 (-) 234 Protein_1714 molybdate ABC transporter permease subunit -
  CVT01_RS08740 (CVT01_08745) - 1778890..1779978 (+) 1089 WP_107714323.1 nicotinate phosphoribosyltransferase -
  CVT01_RS08745 (CVT01_08750) - 1779987..1780484 (+) 498 WP_107714324.1 chemotaxis protein -
  CVT01_RS08750 (CVT01_08755) - 1780597..1781412 (+) 816 WP_230863670.1 MqnA/MqnD/SBP family protein -
  CVT01_RS08755 (CVT01_08760) fliQ 1781409..1781678 (+) 270 WP_228027488.1 flagellar biosynthesis protein FliQ -
  CVT01_RS08760 (CVT01_08765) - 1781675..1782472 (+) 798 WP_107714325.1 UDP-N-acetylmuramate dehydrogenase -
  CVT01_RS08765 (CVT01_08770) - 1782481..1782969 (+) 489 WP_107714326.1 addiction module antitoxin -
  CVT01_RS08770 (CVT01_08775) recA 1783032..1784129 (+) 1098 WP_021085361.1 recombinase RecA Machinery gene
  CVT01_RS08775 (CVT01_08780) eno 1784129..1785379 (+) 1251 WP_021088878.1 phosphopyruvate hydratase -
  CVT01_RS10425 - 1785484..1785666 (+) 183 WP_196377402.1 hypothetical protein -
  CVT01_RS08785 (CVT01_08790) - 1785672..1786532 (+) 861 WP_107714328.1 AMIN domain-containing protein -
  CVT01_RS08790 (CVT01_08795) - 1786585..1786710 (+) 126 Protein_1725 integrase -

Sequence

Protein


Download         Length: 365 a.a.        Molecular weight: 39209.83 Da        Isoelectric Point: 5.0163

>NTDB_id=425788 CVT01_RS08770 WP_021085361.1 1783032..1784129(+) (recA) [Campylobacter concisus strain P1CDO3]
MAKEKDSDKKIAIPESEADKKKALELALKQIDKAFGKGTLLRLGDKEVEAIESIPTGSLGLDLALGIGGVPKGRIIEIYG
PESSGKTTLTLHIIAEAQKAGGICAFVDAEHALDVKYASNLGVNTDNLYVSQPDFGEQALEIVETLARSGAVDLIVVDSV
AALTPKSEIDGDMGDQHVGLQARLMSQALRKLTGILSKMKTTVIFINQIRMKIGMMGYGTPETTTGGNALKFYSSVRIDV
RKIATLKQNDEPIGNRTKAKVVKNKVAPPFKVAEFDIMFGEGVSKEGEIIDYGVKLDIIDKSGAWFSYKAEKLGQGRENA
KAYLKEHPEISDEIVAAIKGSMGIDHLISSGAKDEDDDTNEAGDE

Nucleotide


Download         Length: 1098 bp        

>NTDB_id=425788 CVT01_RS08770 WP_021085361.1 1783032..1784129(+) (recA) [Campylobacter concisus strain P1CDO3]
ATGGCAAAAGAAAAAGATAGTGACAAAAAGATAGCTATCCCAGAGAGCGAAGCGGACAAGAAAAAGGCGCTTGAGCTTGC
ACTAAAGCAGATCGATAAAGCTTTTGGCAAAGGCACGCTTTTAAGACTTGGCGACAAAGAGGTTGAGGCCATCGAGTCGA
TACCGACTGGCTCGCTAGGGCTTGATCTGGCTCTTGGCATAGGCGGCGTTCCAAAAGGCAGGATCATCGAGATCTACGGA
CCAGAGAGCTCTGGTAAGACTACTCTCACACTTCACATCATCGCTGAAGCGCAAAAGGCTGGCGGAATTTGTGCATTTGT
CGATGCAGAGCACGCACTAGACGTAAAATACGCTTCAAATTTAGGCGTAAATACTGACAACCTTTATGTCTCTCAGCCTG
ACTTTGGCGAGCAGGCACTTGAGATCGTTGAGACGCTTGCAAGAAGTGGCGCAGTCGATCTTATCGTGGTTGATAGCGTC
GCTGCCCTTACTCCAAAGAGCGAGATAGACGGCGACATGGGCGATCAGCACGTGGGCCTGCAAGCAAGGCTAATGAGTCA
GGCGCTTAGAAAGCTAACTGGAATTTTAAGCAAGATGAAGACAACCGTCATCTTCATTAACCAAATTCGTATGAAGATCG
GCATGATGGGATATGGCACGCCAGAGACTACAACTGGTGGTAATGCACTTAAATTTTACTCATCTGTAAGAATAGACGTA
AGAAAGATAGCCACACTTAAACAAAATGACGAGCCTATCGGCAACCGCACAAAAGCAAAAGTCGTTAAAAACAAGGTGGC
ACCTCCATTTAAAGTGGCTGAATTTGACATCATGTTTGGCGAGGGTGTGAGCAAAGAGGGCGAGATCATCGACTATGGTG
TAAAACTAGACATCATCGACAAATCAGGTGCGTGGTTTAGCTACAAGGCCGAAAAACTAGGTCAAGGTAGAGAAAATGCC
AAAGCCTACCTAAAAGAGCACCCAGAAATTTCTGACGAGATAGTAGCGGCGATCAAAGGCTCAATGGGGATAGATCACCT
AATAAGCAGCGGCGCAAAAGACGAAGACGACGACACAAACGAAGCAGGAGATGAATAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(22-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0M4TCP9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

82.941

93.151

0.773
  recA Helicobacter pylori 26695

80.308

89.041

0.715
  recA Helicobacter pylori strain NCTC11637

80

89.041

0.712
  recA Glaesserella parasuis strain SC1401

60.218

100

0.605
  recA Neisseria gonorrhoeae MS11

65

93.151

0.605
  recA Neisseria gonorrhoeae strain FA1090

65

93.151

0.605
  recA Neisseria gonorrhoeae MS11

65

93.151

0.605
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

67.584

89.589

0.605
  recA Bacillus subtilis subsp. subtilis str. 168

65.35

90.137

0.589
  recA Acinetobacter baylyi ADP1

62.941

93.151

0.586
  recA Pseudomonas stutzeri DSM 10701

65.123

88.767

0.578
  recA Acinetobacter baumannii D1279779

62.763

91.233

0.573
  recA Streptococcus pneumoniae TIGR4

61.934

90.685

0.562
  recA Streptococcus pneumoniae Rx1

61.934

90.685

0.562
  recA Streptococcus pneumoniae D39

61.934

90.685

0.562
  recA Streptococcus pneumoniae R6

61.934

90.685

0.562
  recA Streptococcus mitis NCTC 12261

61.631

90.685

0.559
  recA Streptococcus pyogenes NZ131

61.702

90.137

0.556
  recA Vibrio cholerae O1 biovar El Tor strain E7946

64.856

85.753

0.556
  recA Vibrio cholerae strain A1552

64.856

85.753

0.556
  recA Streptococcus mitis SK321

61.027

90.685

0.553
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

59.118

93.151

0.551
  recA Lactococcus lactis subsp. cremoris KW2

60.423

90.685

0.548
  recA Latilactobacillus sakei subsp. sakei 23K

58.309

93.973

0.548
  recA Ralstonia pseudosolanacearum GMI1000

63.091

86.849

0.548
  recA Streptococcus mutans UA159

60.303

90.411

0.545