Detailed information
Bioinformatically predicted
Overview
| Name | rexB | Type | Machinery gene |
| Locus tag | IBC04_RS08150 | Genome accession | NZ_CP061020 |
| Coordinates | 1578890..1582210 (-) | Length | 1106 a.a. |
| NCBI ID | WP_014608680.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus strain 24740 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1573890..1587210
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IBC04_RS08140 (IBC04_08155) | - | 1574164..1574895 (+) | 732 | WP_014608678.1 | DUF554 domain-containing protein | - |
| IBC04_RS08145 (IBC04_08160) | rexA | 1575247..1578900 (-) | 3654 | WP_014608679.1 | helicase-exonuclease AddAB subunit AddA | Machinery gene |
| IBC04_RS08150 (IBC04_08165) | rexB | 1578890..1582210 (-) | 3321 | WP_014608680.1 | ATP-dependent nuclease subunit B | Machinery gene |
| IBC04_RS10600 (IBC04_08170) | - | 1582701..1583352 (-) | 652 | Protein_1574 | hypothetical protein | - |
| IBC04_RS10605 (IBC04_08175) | - | 1583402..1583835 (-) | 434 | Protein_1575 | LytTR family DNA-binding domain-containing protein | - |
| IBC04_RS08165 (IBC04_08180) | - | 1584053..1584673 (-) | 621 | WP_014608684.1 | hypothetical protein | - |
| IBC04_RS08170 (IBC04_08185) | - | 1585135..1586158 (-) | 1024 | Protein_1577 | DUF6574 domain-containing protein | - |
Sequence
Protein
Download Length: 1106 a.a. Molecular weight: 126844.67 Da Isoelectric Point: 5.0324
>NTDB_id=419098 IBC04_RS08150 WP_014608680.1 1578890..1582210(-) (rexB) [Streptococcus thermophilus strain 24740]
MKLLYTDMSQDLTEILTEQASSYAQKGKRVFYIAPSALSFEKERKVLEYLPQSASFDITVTRFTQMARYFILNTSNPKTQ
LDDTGLAMIFYKVLLHMGDDELKVYGRLRKDSNFINQLVDLYKELQQANMTVLDLQHLDQVEKQEDLVRIFSAAQDLLLA
GDFDNQSKLSAFFKEITSGHLDEALSNTVLVIDGFTRFSAEEEALVALLNDKCHQIVVGTYTSQKAYKANFVYGNVYQAS
VDFLRTLAQTYKVIPDYVTTDKEGNLSFARISRLLESRHDFSTVDETVTEQDKHALKVWEVVNQKEEVAQVAKSIRQLLA
DGKRYKDILVLLGDEESYKLHVGQIFRKFDIPYYFGKEESMSSHPLVEFVDSLERIKRYNYRAEDLLNLVKSGLYGGFAQ
EDLDLFEYYVNFADIKGRHKFLSDFTANSRDKYNLDQINALRSQLIEPLDKFLNSRKQKGSSLLKKLVVFLEAVQLPSQM
FELSTKASEAEKEQNEQVWKAFTHILEQVETIFGDESLLVDDFLSILRSGMLACDYRTVPVTVDVVNVKKYDLIQPHSAP
YVFALGMTQSHFPKVGQNKSLLSDEERSRINEATDEHRRLDIVTQINSKRGHFVAMSLFNAASEQLVLSQPQIINESQDD
MSVYLKELLDLGIPLVEKGRNRFEAKGDQIGNYRDLLSTVIALNSSHLDLDLDKETQTFWSVAVRYLRKRLDKDQVLIPK
VIDDVTTTKVDDQVMQLVFPEEEPLKLSATALTTFYNNQYLYFLRYVLELEELESIHPDARHHGTYLHRVFERVMGDSSS
ESFDDKLEKAIAQTNQDQPFEILYTEDQESRFSRQILEDIARSTASVLRDNAAVKVEREEVKFDLLLANSIKITGIIDRV
DRLTDGALGVVDYKTGKNVFDIQKFYNGLSPQLVTYLEALRQTYKVDADQLFGAMYLHMQVPQLNLAQIGLEKLAAQAHK
ELTYKGLFVSSETEHLTGGNYDLQKTVTYDKEDLETLLDYNIKLFRSAAEVIRSGNFAINPYTEDGKSVQGDQIKSITHF
EADRHMGQARKLLRLPKKGKKEAYLELMAKTEEENQMQVSENTISFPVIDHAVRVDKKDQEDNHVD
MKLLYTDMSQDLTEILTEQASSYAQKGKRVFYIAPSALSFEKERKVLEYLPQSASFDITVTRFTQMARYFILNTSNPKTQ
LDDTGLAMIFYKVLLHMGDDELKVYGRLRKDSNFINQLVDLYKELQQANMTVLDLQHLDQVEKQEDLVRIFSAAQDLLLA
GDFDNQSKLSAFFKEITSGHLDEALSNTVLVIDGFTRFSAEEEALVALLNDKCHQIVVGTYTSQKAYKANFVYGNVYQAS
VDFLRTLAQTYKVIPDYVTTDKEGNLSFARISRLLESRHDFSTVDETVTEQDKHALKVWEVVNQKEEVAQVAKSIRQLLA
DGKRYKDILVLLGDEESYKLHVGQIFRKFDIPYYFGKEESMSSHPLVEFVDSLERIKRYNYRAEDLLNLVKSGLYGGFAQ
EDLDLFEYYVNFADIKGRHKFLSDFTANSRDKYNLDQINALRSQLIEPLDKFLNSRKQKGSSLLKKLVVFLEAVQLPSQM
FELSTKASEAEKEQNEQVWKAFTHILEQVETIFGDESLLVDDFLSILRSGMLACDYRTVPVTVDVVNVKKYDLIQPHSAP
YVFALGMTQSHFPKVGQNKSLLSDEERSRINEATDEHRRLDIVTQINSKRGHFVAMSLFNAASEQLVLSQPQIINESQDD
MSVYLKELLDLGIPLVEKGRNRFEAKGDQIGNYRDLLSTVIALNSSHLDLDLDKETQTFWSVAVRYLRKRLDKDQVLIPK
VIDDVTTTKVDDQVMQLVFPEEEPLKLSATALTTFYNNQYLYFLRYVLELEELESIHPDARHHGTYLHRVFERVMGDSSS
ESFDDKLEKAIAQTNQDQPFEILYTEDQESRFSRQILEDIARSTASVLRDNAAVKVEREEVKFDLLLANSIKITGIIDRV
DRLTDGALGVVDYKTGKNVFDIQKFYNGLSPQLVTYLEALRQTYKVDADQLFGAMYLHMQVPQLNLAQIGLEKLAAQAHK
ELTYKGLFVSSETEHLTGGNYDLQKTVTYDKEDLETLLDYNIKLFRSAAEVIRSGNFAINPYTEDGKSVQGDQIKSITHF
EADRHMGQARKLLRLPKKGKKEAYLELMAKTEEENQMQVSENTISFPVIDHAVRVDKKDQEDNHVD
Nucleotide
Download Length: 3321 bp
>NTDB_id=419098 IBC04_RS08150 WP_014608680.1 1578890..1582210(-) (rexB) [Streptococcus thermophilus strain 24740]
ATGAAATTACTTTATACGGATATGTCTCAGGATTTAACAGAAATTCTGACGGAGCAGGCGTCTAGCTATGCTCAAAAGGG
AAAGAGGGTTTTTTATATTGCTCCTAGTGCCCTGTCCTTTGAAAAGGAGCGAAAGGTTTTAGAATACCTGCCTCAGTCAG
CATCTTTTGACATTACGGTGACTCGTTTTACTCAGATGGCTAGGTATTTTATTCTCAATACGAGTAACCCAAAGACTCAG
TTGGATGATACAGGTTTGGCCATGATTTTTTATAAAGTGTTGTTGCACATGGGAGATGATGAGCTCAAGGTCTATGGCCG
TTTGCGTAAGGATAGCAACTTTATTAATCAATTAGTGGACCTTTATAAAGAGTTGCAGCAGGCCAATATGACAGTATTGG
ATTTGCAGCATTTGGATCAGGTTGAAAAACAAGAGGATTTGGTAAGGATTTTCAGTGCAGCTCAGGACCTCTTGTTGGCA
GGAGATTTTGACAATCAATCAAAGCTTAGTGCCTTCTTTAAGGAAATTACCTCAGGGCATCTGGATGAGGCCTTGAGTAA
CACAGTTTTGGTCATTGATGGTTTTACCCGTTTCTCGGCTGAGGAGGAGGCTCTGGTTGCACTCTTGAACGACAAGTGCC
ACCAGATTGTAGTGGGGACCTATACTAGTCAAAAAGCTTATAAGGCCAATTTTGTTTATGGCAATGTTTATCAAGCCTCA
GTGGATTTCTTGAGGACTTTGGCTCAGACCTATAAGGTGATACCCGACTACGTGACGACAGACAAGGAGGGCAATCTTTC
TTTTGCGCGTATTAGTCGTCTTTTGGAGAGCCGTCATGACTTTAGTACGGTAGATGAGACGGTAACTGAGCAGGATAAGC
ATGCCCTGAAGGTTTGGGAAGTGGTCAACCAGAAAGAAGAAGTGGCCCAGGTTGCCAAGAGTATTCGCCAGTTGCTGGCA
GATGGCAAGCGTTACAAGGATATTTTGGTCTTGCTTGGTGACGAGGAGAGTTATAAGCTTCACGTGGGGCAGATTTTCCG
AAAATTTGATATTCCTTATTATTTCGGTAAGGAAGAAAGCATGTCTAGCCATCCTTTGGTGGAGTTTGTGGATTCGCTAG
AGCGTATCAAGCGCTATAACTACCGTGCTGAGGATTTGCTTAACCTTGTAAAATCCGGTCTCTATGGTGGTTTTGCTCAA
GAGGATTTAGACCTTTTTGAGTATTATGTCAATTTTGCGGATATCAAGGGGCGTCATAAATTCTTGTCTGATTTTACAGC
TAATAGTCGTGATAAGTATAATTTAGACCAGATCAATGCCTTGCGGTCACAATTGATAGAGCCCTTGGACAAGTTTCTTA
ATAGTCGCAAACAAAAGGGATCTAGTCTACTCAAGAAACTGGTGGTCTTTTTAGAGGCTGTGCAACTGCCAAGTCAGATG
TTTGAATTGTCCACCAAGGCCAGTGAAGCTGAAAAAGAACAGAATGAACAGGTTTGGAAGGCTTTCACTCATATCTTGGA
GCAGGTTGAGACTATCTTTGGAGACGAATCGCTCTTAGTGGACGACTTTTTGTCTATCTTGCGTTCGGGAATGTTGGCCT
GTGATTACCGTACGGTTCCAGTCACTGTTGATGTGGTCAATGTGAAAAAATACGACTTAATACAGCCACATTCGGCTCCG
TATGTTTTTGCCTTGGGGATGACCCAGTCACATTTTCCTAAGGTAGGACAAAATAAGAGTCTTTTGTCTGATGAGGAGCG
TAGTCGTATCAATGAGGCGACGGATGAGCACAGGAGATTGGATATTGTTACGCAGATCAATAGTAAGCGAGGTCATTTTG
TGGCTATGTCGCTTTTCAATGCTGCTAGTGAACAATTAGTGCTTAGTCAGCCACAAATTATAAATGAAAGTCAAGATGAC
ATGTCTGTTTATTTGAAGGAGCTTCTTGACCTTGGTATTCCATTGGTGGAAAAGGGACGCAATCGTTTCGAAGCAAAGGG
GGACCAGATTGGGAACTATAGAGACCTTCTGTCGACTGTCATTGCCCTTAACAGTAGTCATTTGGATCTTGACTTGGACA
AAGAAACCCAGACTTTCTGGTCGGTTGCTGTACGCTATCTCCGTAAGCGACTTGATAAGGATCAAGTCTTGATTCCAAAG
GTGATTGACGATGTGACGACAACCAAGGTGGACGATCAGGTCATGCAGTTGGTCTTTCCGGAGGAAGAACCACTGAAATT
ATCAGCTACAGCTCTGACGACCTTCTATAACAACCAATATCTTTATTTCTTGCGTTATGTTTTGGAACTTGAGGAGCTAG
AGTCTATCCATCCGGATGCTCGACACCACGGGACTTATTTACACCGAGTCTTTGAGCGTGTGATGGGTGATTCGTCATCA
GAAAGCTTCGATGATAAATTGGAAAAGGCCATTGCTCAGACCAATCAGGATCAACCTTTTGAAATTCTCTATACCGAGGA
CCAAGAGAGTCGTTTCTCTCGTCAGATTTTGGAGGACATTGCGCGTTCAACTGCCAGTGTTCTACGTGACAATGCGGCGG
TTAAGGTTGAGCGTGAGGAAGTCAAGTTTGACTTGCTTTTAGCAAATAGCATCAAGATTACTGGGATTATTGACCGAGTG
GACCGTTTAACAGATGGTGCTCTGGGTGTTGTTGACTATAAAACAGGTAAAAATGTCTTTGATATTCAGAAATTCTACAA
TGGCCTCAGTCCGCAATTGGTGACCTATCTGGAGGCTCTCCGTCAAACCTATAAGGTTGATGCTGATCAACTTTTTGGGG
CTATGTATCTTCACATGCAGGTCCCACAGCTTAACCTAGCTCAGATTGGTTTGGAAAAGCTAGCGGCTCAGGCTCATAAG
GAATTGACTTACAAGGGACTTTTTGTGTCTTCAGAAACGGAGCATTTGACTGGTGGAAACTATGATCTGCAAAAGACTGT
CACCTATGACAAGGAGGATTTAGAAACCTTGTTGGACTACAATATTAAGCTCTTTAGGAGTGCTGCTGAAGTTATTCGAA
GTGGGAATTTTGCGATCAATCCTTATACTGAGGATGGCAAGTCTGTTCAAGGGGATCAAATCAAGTCTATTACTCACTTC
GAGGCCGACCGCCACATGGGACAGGCTCGTAAACTCTTACGTTTACCCAAAAAGGGCAAGAAGGAAGCCTATTTGGAGTT
GATGGCAAAAACTGAGGAAGAGAATCAGATGCAAGTTTCTGAAAATACTATCTCCTTTCCAGTCATTGATCATGCTGTGA
GAGTAGACAAAAAAGACCAGGAGGATAACCATGTTGACTAA
ATGAAATTACTTTATACGGATATGTCTCAGGATTTAACAGAAATTCTGACGGAGCAGGCGTCTAGCTATGCTCAAAAGGG
AAAGAGGGTTTTTTATATTGCTCCTAGTGCCCTGTCCTTTGAAAAGGAGCGAAAGGTTTTAGAATACCTGCCTCAGTCAG
CATCTTTTGACATTACGGTGACTCGTTTTACTCAGATGGCTAGGTATTTTATTCTCAATACGAGTAACCCAAAGACTCAG
TTGGATGATACAGGTTTGGCCATGATTTTTTATAAAGTGTTGTTGCACATGGGAGATGATGAGCTCAAGGTCTATGGCCG
TTTGCGTAAGGATAGCAACTTTATTAATCAATTAGTGGACCTTTATAAAGAGTTGCAGCAGGCCAATATGACAGTATTGG
ATTTGCAGCATTTGGATCAGGTTGAAAAACAAGAGGATTTGGTAAGGATTTTCAGTGCAGCTCAGGACCTCTTGTTGGCA
GGAGATTTTGACAATCAATCAAAGCTTAGTGCCTTCTTTAAGGAAATTACCTCAGGGCATCTGGATGAGGCCTTGAGTAA
CACAGTTTTGGTCATTGATGGTTTTACCCGTTTCTCGGCTGAGGAGGAGGCTCTGGTTGCACTCTTGAACGACAAGTGCC
ACCAGATTGTAGTGGGGACCTATACTAGTCAAAAAGCTTATAAGGCCAATTTTGTTTATGGCAATGTTTATCAAGCCTCA
GTGGATTTCTTGAGGACTTTGGCTCAGACCTATAAGGTGATACCCGACTACGTGACGACAGACAAGGAGGGCAATCTTTC
TTTTGCGCGTATTAGTCGTCTTTTGGAGAGCCGTCATGACTTTAGTACGGTAGATGAGACGGTAACTGAGCAGGATAAGC
ATGCCCTGAAGGTTTGGGAAGTGGTCAACCAGAAAGAAGAAGTGGCCCAGGTTGCCAAGAGTATTCGCCAGTTGCTGGCA
GATGGCAAGCGTTACAAGGATATTTTGGTCTTGCTTGGTGACGAGGAGAGTTATAAGCTTCACGTGGGGCAGATTTTCCG
AAAATTTGATATTCCTTATTATTTCGGTAAGGAAGAAAGCATGTCTAGCCATCCTTTGGTGGAGTTTGTGGATTCGCTAG
AGCGTATCAAGCGCTATAACTACCGTGCTGAGGATTTGCTTAACCTTGTAAAATCCGGTCTCTATGGTGGTTTTGCTCAA
GAGGATTTAGACCTTTTTGAGTATTATGTCAATTTTGCGGATATCAAGGGGCGTCATAAATTCTTGTCTGATTTTACAGC
TAATAGTCGTGATAAGTATAATTTAGACCAGATCAATGCCTTGCGGTCACAATTGATAGAGCCCTTGGACAAGTTTCTTA
ATAGTCGCAAACAAAAGGGATCTAGTCTACTCAAGAAACTGGTGGTCTTTTTAGAGGCTGTGCAACTGCCAAGTCAGATG
TTTGAATTGTCCACCAAGGCCAGTGAAGCTGAAAAAGAACAGAATGAACAGGTTTGGAAGGCTTTCACTCATATCTTGGA
GCAGGTTGAGACTATCTTTGGAGACGAATCGCTCTTAGTGGACGACTTTTTGTCTATCTTGCGTTCGGGAATGTTGGCCT
GTGATTACCGTACGGTTCCAGTCACTGTTGATGTGGTCAATGTGAAAAAATACGACTTAATACAGCCACATTCGGCTCCG
TATGTTTTTGCCTTGGGGATGACCCAGTCACATTTTCCTAAGGTAGGACAAAATAAGAGTCTTTTGTCTGATGAGGAGCG
TAGTCGTATCAATGAGGCGACGGATGAGCACAGGAGATTGGATATTGTTACGCAGATCAATAGTAAGCGAGGTCATTTTG
TGGCTATGTCGCTTTTCAATGCTGCTAGTGAACAATTAGTGCTTAGTCAGCCACAAATTATAAATGAAAGTCAAGATGAC
ATGTCTGTTTATTTGAAGGAGCTTCTTGACCTTGGTATTCCATTGGTGGAAAAGGGACGCAATCGTTTCGAAGCAAAGGG
GGACCAGATTGGGAACTATAGAGACCTTCTGTCGACTGTCATTGCCCTTAACAGTAGTCATTTGGATCTTGACTTGGACA
AAGAAACCCAGACTTTCTGGTCGGTTGCTGTACGCTATCTCCGTAAGCGACTTGATAAGGATCAAGTCTTGATTCCAAAG
GTGATTGACGATGTGACGACAACCAAGGTGGACGATCAGGTCATGCAGTTGGTCTTTCCGGAGGAAGAACCACTGAAATT
ATCAGCTACAGCTCTGACGACCTTCTATAACAACCAATATCTTTATTTCTTGCGTTATGTTTTGGAACTTGAGGAGCTAG
AGTCTATCCATCCGGATGCTCGACACCACGGGACTTATTTACACCGAGTCTTTGAGCGTGTGATGGGTGATTCGTCATCA
GAAAGCTTCGATGATAAATTGGAAAAGGCCATTGCTCAGACCAATCAGGATCAACCTTTTGAAATTCTCTATACCGAGGA
CCAAGAGAGTCGTTTCTCTCGTCAGATTTTGGAGGACATTGCGCGTTCAACTGCCAGTGTTCTACGTGACAATGCGGCGG
TTAAGGTTGAGCGTGAGGAAGTCAAGTTTGACTTGCTTTTAGCAAATAGCATCAAGATTACTGGGATTATTGACCGAGTG
GACCGTTTAACAGATGGTGCTCTGGGTGTTGTTGACTATAAAACAGGTAAAAATGTCTTTGATATTCAGAAATTCTACAA
TGGCCTCAGTCCGCAATTGGTGACCTATCTGGAGGCTCTCCGTCAAACCTATAAGGTTGATGCTGATCAACTTTTTGGGG
CTATGTATCTTCACATGCAGGTCCCACAGCTTAACCTAGCTCAGATTGGTTTGGAAAAGCTAGCGGCTCAGGCTCATAAG
GAATTGACTTACAAGGGACTTTTTGTGTCTTCAGAAACGGAGCATTTGACTGGTGGAAACTATGATCTGCAAAAGACTGT
CACCTATGACAAGGAGGATTTAGAAACCTTGTTGGACTACAATATTAAGCTCTTTAGGAGTGCTGCTGAAGTTATTCGAA
GTGGGAATTTTGCGATCAATCCTTATACTGAGGATGGCAAGTCTGTTCAAGGGGATCAAATCAAGTCTATTACTCACTTC
GAGGCCGACCGCCACATGGGACAGGCTCGTAAACTCTTACGTTTACCCAAAAAGGGCAAGAAGGAAGCCTATTTGGAGTT
GATGGCAAAAACTGAGGAAGAGAATCAGATGCAAGTTTCTGAAAATACTATCTCCTTTCCAGTCATTGATCATGCTGTGA
GAGTAGACAAAAAAGACCAGGAGGATAACCATGTTGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rexB | Streptococcus pneumoniae R6 |
42.923 |
98.373 |
0.422 |