Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   E3T00_RS12735 Genome accession   NZ_CP047784
Coordinates   2586337..2587224 (-) Length   295 a.a.
NCBI ID   WP_043044899.1    Uniprot ID   -
Organism   Staphylococcus aureus strain UP_1209     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2581337..2592224
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3T00_RS12705 (E3T00_12705) - 2581355..2581447 (+) 93 WP_010956583.1 hypothetical protein -
  E3T00_RS12710 (E3T00_12710) - 2581555..2582052 (-) 498 WP_043044901.1 glutathione peroxidase -
  E3T00_RS12715 (E3T00_12715) - 2582062..2582322 (-) 261 WP_001789910.1 hypothetical protein -
  E3T00_RS12720 (E3T00_12720) - 2582704..2582817 (-) 114 WP_011447078.1 hypothetical protein -
  E3T00_RS12725 (E3T00_12725) - 2583476..2585476 (-) 2001 WP_043044900.1 ABC transporter permease -
  E3T00_RS12730 (E3T00_12730) - 2585473..2586228 (-) 756 WP_000923768.1 ABC transporter ATP-binding protein -
  E3T00_RS12735 (E3T00_12735) braS 2586337..2587224 (-) 888 WP_043044899.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  E3T00_RS12740 (E3T00_12740) braR 2587235..2587900 (-) 666 WP_000697879.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  E3T00_RS12745 (E3T00_12745) - 2587926..2588126 (-) 201 WP_000604727.1 hypothetical protein -
  E3T00_RS12750 (E3T00_12750) - 2588324..2589748 (+) 1425 WP_000953744.1 alkaline phosphatase -
  E3T00_RS13435 - 2589808..2589909 (-) 102 WP_000731972.1 SE2200 family small protein -
  E3T00_RS12760 (E3T00_12760) - 2590031..2590486 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  E3T00_RS12765 (E3T00_12765) - 2590731..2591492 (-) 762 WP_043044898.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34073.33 Da        Isoelectric Point: 5.8962

>NTDB_id=416066 E3T00_RS12735 WP_043044899.1 2586337..2587224(-) (braS) [Staphylococcus aureus strain UP_1209]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYRNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=416066 E3T00_RS12735 WP_043044899.1 2586337..2587224(-) (braS) [Staphylococcus aureus strain UP_1209]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAGAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTTAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGTCAAAGTAACTCAAGTGGGATTGGCTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.983

100

0.99


Multiple sequence alignment