Detailed information NTG0414985

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: H8S71_RS01655
• Genome accession: NZ_CP060417
• Coordinates: 302649..303770 (+)
• Length: 373 a.a.
• NCBI ID: WP_187002045.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain ONU 559
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 297649..308770

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H8S71_RS01630 (H8S71_01625)	ycdA	297654..298718 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
H8S71_RS01635 (H8S71_01630)	-	298741..298872 (-)	132	WP_003246334.1	hypothetical protein	-
H8S71_RS01640 (H8S71_01635)	ycdB	299046..300467 (+)	1422	WP_125121478.1	YcdB/YcdC domain-containing protein	-
H8S71_RS01645 (H8S71_01640)	ycdC	300654..302015 (+)	1362	WP_187002279.1	YcdB/YcdC domain-containing protein	-
H8S71_RS01650 (H8S71_01645)	cwlK	302023..302526 (-)	504	WP_017695036.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
H8S71_RS01655 (H8S71_01650)	rapF	302649..303770 (+)	1122	WP_187002045.1	response regulator aspartate phosphatase RapJ	Regulator
H8S71_RS01660 (H8S71_01655)	ycdF	303877..304653 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
H8S71_RS01665 (H8S71_01660)	ycdG	304678..306363 (+)	1686	WP_046160023.1	alpha-glucosidase	-
H8S71_RS01670 (H8S71_01665)	znuA	306551..307510 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
H8S71_RS01675 (H8S71_01670)	znuC	307565..308260 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44414.31 Da
• Isoelectric Point: 4.8344

>NTDB_id=414985 H8S71_RS01655 WP_187002045.1 302649..303770(+) (rapF) [Bacillus subtilis subsp. subtilis strain ONU 559]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYETAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=414985 H8S71_RS01655 WP_187002045.1 302649..303770(+) (rapF) [Bacillus subtilis subsp. subtilis strain ONU 559]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCATTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATATTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGTCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGACCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405