Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   GTW28_RS21335 Genome accession   NZ_CP047485
Coordinates   381939..382079 (+) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain BJQ0005     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 376939..387079
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GTW28_RS21330 srfAB 378803..381895 (+) 3093 Protein_349 surfactin non-ribosomal peptide synthetase SrfAB -
  GTW28_RS21335 comS 381939..382079 (+) 141 WP_010886404.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=413720 GTW28_RS21335 WP_010886404.1 381939..382079(+) (comS) [Bacillus subtilis strain BJQ0005]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=413720 GTW28_RS21335 WP_010886404.1 381939..382079(+) (comS) [Bacillus subtilis strain BJQ0005]
TTGAATCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment