Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   GPY14_RS08855 Genome accession   NZ_CP046918
Coordinates   1876568..1877506 (-) Length   312 a.a.
NCBI ID   WP_020954300.1    Uniprot ID   -
Organism   Bacillus velezensis strain BA-26     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 1871568..1882506
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPY14_RS08820 (GPY14_08815) - 1871775..1872251 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  GPY14_RS08825 (GPY14_08820) - 1872251..1872535 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  GPY14_RS08830 (GPY14_08825) mnhG 1872519..1872893 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  GPY14_RS08835 (GPY14_08830) - 1872933..1873316 (-) 384 WP_007408674.1 hotdog fold thioesterase -
  GPY14_RS08840 (GPY14_08835) comA 1873338..1873982 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  GPY14_RS08845 (GPY14_08840) comP 1874063..1876372 (-) 2310 WP_033574914.1 histidine kinase Regulator
  GPY14_RS08850 (GPY14_08845) - 1876392..1876568 (-) 177 WP_007408675.1 competence pheromone ComX -
  GPY14_RS08855 (GPY14_08850) comQ 1876568..1877506 (-) 939 WP_020954300.1 polyprenyl synthetase family protein Regulator
  GPY14_RS08860 (GPY14_08855) degQ 1877637..1877777 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  GPY14_RS08865 (GPY14_08860) - 1878243..1878584 (+) 342 WP_015418107.1 hypothetical protein -
  GPY14_RS08870 (GPY14_08865) - 1878591..1879814 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  GPY14_RS08875 (GPY14_08870) - 1879944..1881410 (-) 1467 WP_020954301.1 nicotinate phosphoribosyltransferase -
  GPY14_RS08880 (GPY14_08875) - 1881428..1881979 (-) 552 WP_003152033.1 cysteine hydrolase family protein -
  GPY14_RS08885 (GPY14_08880) - 1882076..1882474 (-) 399 WP_003152031.1 YueI family protein -

Sequence


Protein


Download         Length: 312 a.a.        Molecular weight: 35893.29 Da        Isoelectric Point: 6.3951

>NTDB_id=409350 GPY14_RS08855 WP_020954300.1 1876568..1877506(-) (comQ) [Bacillus velezensis strain BA-26]
MKTIIEQMCLDANQIKNKMKSIIEQNIFNQHLLQLLLGFVESRKYLTFAESALLHYEVFGGRDFKTAEKLAAGIEILTLS
ADIIDDLEDEDNKQALWMKIDRSEALSAAFSLYTAGLQGINSINMNPFILSYILKYTQDAMQGQHDDIINKPEKEDESLE
VIRLKCGSLFALSNVAGTMLATGKYNETVETYSYYKGMFEQIYSDYLALFSSKRSDILKDKHTLINLYLKRLFNEPSEKL
VRMFSHRETHLKFISDKNNFIQTLTDAGVTQYVSVLHQLYKQKCENAIEKLNLETSKIDKLKKYVVNRGIEV

Nucleotide


Download         Length: 939 bp        

>NTDB_id=409350 GPY14_RS08855 WP_020954300.1 1876568..1877506(-) (comQ) [Bacillus velezensis strain BA-26]
GTGAAGACAATTATTGAGCAAATGTGTTTAGATGCCAACCAAATCAAGAATAAAATGAAGAGTATAATAGAGCAAAACAT
ATTTAATCAACATTTACTACAGCTTCTTCTTGGGTTTGTTGAATCCAGAAAATATTTAACCTTTGCTGAATCTGCTTTAT
TGCATTATGAAGTTTTTGGCGGAAGGGATTTTAAGACTGCTGAGAAACTTGCGGCGGGAATTGAAATTCTTACGCTTTCC
GCCGATATTATTGATGATCTTGAAGATGAAGATAACAAACAAGCTCTTTGGATGAAGATAGACCGTTCAGAAGCTTTAAG
CGCAGCTTTTTCATTATACACAGCAGGGCTGCAGGGGATTAATTCAATTAACATGAATCCTTTTATTCTTTCTTACATAC
TGAAATATACACAAGACGCTATGCAAGGACAACACGATGATATAATCAATAAGCCAGAGAAAGAAGATGAAAGTTTAGAG
GTCATTAGATTAAAATGCGGGAGTCTATTCGCTCTATCCAATGTGGCAGGTACTATGTTAGCAACTGGAAAGTATAATGA
AACTGTTGAAACGTATTCCTATTACAAAGGAATGTTTGAACAGATATATAGTGATTATCTGGCTCTTTTCAGCTCTAAAC
GCAGTGATATTTTAAAAGATAAACACACGTTAATCAACTTGTACCTTAAGAGGCTGTTTAACGAGCCTTCTGAAAAATTG
GTTCGTATGTTTTCTCATAGAGAAACACACCTTAAGTTTATATCTGATAAAAACAATTTTATTCAGACATTAACTGATGC
AGGTGTTACTCAGTATGTTTCAGTTTTACACCAATTGTATAAGCAAAAATGTGAAAATGCTATAGAGAAACTAAATCTTG
AAACCAGTAAAATAGATAAATTGAAAAAATATGTAGTTAATAGGGGGATTGAAGTATAA

Domains


Predicted by InterproScan.

(53-247)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

62.456

91.346

0.571


Multiple sequence alignment