Detailed information NTG0408002

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GPY18_RS12750
• Genome accession: NZ_CP046800
• Coordinates: 1256657..1257709 (-)
• Length: 350 a.a.
• NCBI ID: WP_024374201.1
• Uniprot ID: -
• Organism: Vibrio fluvialis strain 2012V-1235
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1251657..1262709

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY18_RS12730	csrA	1251675..1251872 (-)	198	WP_004415691.1	carbon storage regulator CsrA	-
GPY18_RS12735	-	1251965..1253152 (-)	1188	WP_020330436.1	aspartate kinase	-
GPY18_RS12740	alaS	1253359..1255941 (-)	2583	WP_158146858.1	alanine--tRNA ligase	-
GPY18_RS12745	recX	1256129..1256587 (-)	459	WP_055452611.1	recombination regulator RecX	-
GPY18_RS12750	recA	1256657..1257709 (-)	1053	WP_024374201.1	recombinase RecA	Machinery gene
GPY18_RS12755	pncC	1257882..1258370 (-)	489	WP_158146859.1	nicotinamide-nucleotide amidase	-
GPY18_RS12760	mutS	1258455..1261016 (+)	2562	WP_020429690.1	DNA mismatch repair protein MutS	-
GPY18_RS12765	rpoS	1261085..1262071 (-)	987	WP_020429689.1	RNA polymerase sigma factor RpoS	Regulator

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 38078.56 Da
• Isoelectric Point: 4.9925

>NTDB_id=408002 GPY18_RS12750 WP_024374201.1 1256657..1257709(-) (recA) [Vibrio fluvialis strain 2012V-1235]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIS
AAQREGKTCAFIDAEHALDPVYARRLGVKIDELLVSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIELGVKHKLVEKAGAWYSYNGDKIGQGKANACKYLRENPEVAKFIDS
KLREMLLNPEQVAVSEEPEFGSVPEQEEEF

Nucleotide

• Length: 1053 bp

>NTDB_id=408002 GPY18_RS12750 WP_024374201.1 1256657..1257709(-) (recA) [Vibrio fluvialis strain 2012V-1235]
ATGGACGAGAACAAACAGAAGGCTCTGGCCGCAGCCCTGGGTCAAATTGAAAAGCAATTCGGTAAAGGTTCTATCATGCG
CTTGGGTGACAACCGCACGATGGACGTAGAAACGATTTCTACCGGTTCACTTTCTCTGGATATCGCCTTGGGTGCGGGTG
GCCTGCCAATGGGTCGTATCGTGGAAATCTACGGTCCGGAATCATCAGGTAAAACGACGCTGACTCTGGAACTGATCTCA
GCGGCTCAGCGCGAAGGTAAAACATGTGCCTTCATTGATGCAGAGCACGCTCTGGATCCAGTTTATGCTCGTCGTCTGGG
CGTGAAAATTGATGAACTGCTGGTGTCTCAGCCAGATACAGGTGAACAGGCGCTGGAAATCTGTGATGCATTGGCGCGTT
CAGGTGCTGTTGACGTTATCGTCGTTGACTCGGTTGCAGCACTGACACCAAAAGCGGAAATTGAAGGCGAAATGGGCGAC
AGCCACATGGGTCTGCAAGCGCGTATGCTGTCGCAAGCGATGCGTAAACTGACGGGTAACCTGAAACAGTCAAACTGTAT
GTGTATCTTCATCAACCAAATCCGTATGAAGATTGGTGTGATGTTCGGTAACCCAGAAACCACTACTGGTGGTAACGCAC
TGAAATTCTACGCATCTGTTCGTCTGGATATTCGTCGTACCGGTTCTATCAAAGAAGGCGATGAAGTTGTCGGTAACGAA
ACTCGTATCAAAGTAGTGAAGAACAAGATTGCGGCACCATTTAAAGAAGCCAACACGCAAATCATGTACGGCCAAGGCTT
TAACCGTGAAGGTGAGCTGATTGAACTGGGCGTGAAGCACAAGCTGGTAGAAAAGGCAGGTGCTTGGTACAGCTACAACG
GCGACAAAATTGGTCAAGGTAAAGCGAACGCGTGCAAATACCTGAGAGAAAATCCTGAAGTGGCTAAATTCATCGACAGC
AAACTGCGTGAAATGCTGCTGAACCCTGAACAAGTTGCGGTCAGCGAAGAGCCGGAATTTGGTTCAGTGCCAGAACAAGA
AGAAGAGTTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	90.652	100	0.914
recA	Vibrio cholerae O1 biovar El Tor strain E7946	90.652	100	0.914
recA	Pseudomonas stutzeri DSM 10701	72.727	97.429	0.709
recA	Acinetobacter baumannii D1279779	71.304	98.571	0.703
recA	Acinetobacter baylyi ADP1	71.848	97.429	0.7
recA	Glaesserella parasuis strain SC1401	71.601	94.571	0.677
recA	Neisseria gonorrhoeae MS11	65.714	100	0.657
recA	Neisseria gonorrhoeae MS11	65.714	100	0.657
recA	Neisseria gonorrhoeae strain FA1090	65.714	100	0.657
recA	Ralstonia pseudosolanacearum GMI1000	72.026	88.857	0.64
recA	Streptococcus mitis SK321	60.114	100	0.603
recA	Streptococcus mitis NCTC 12261	59.829	100	0.6
recA	Streptococcus pneumoniae TIGR4	59.714	100	0.597
recA	Streptococcus pneumoniae R6	59.714	100	0.597
recA	Streptococcus pneumoniae D39	59.714	100	0.597
recA	Streptococcus pneumoniae Rx1	59.714	100	0.597
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.294	97.143	0.586
recA	Helicobacter pylori 26695	59.706	97.143	0.58
recA	Helicobacter pylori strain NCTC11637	59.412	97.143	0.577
recA	Bacillus subtilis subsp. subtilis str. 168	62.305	91.714	0.571
recA	Streptococcus mutans UA159	61.538	92.857	0.571
recA	Streptococcus pyogenes NZ131	61.231	92.857	0.569
recA	Lactococcus lactis subsp. cremoris KW2	59.403	95.714	0.569
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.639	94.857	0.566
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	91.714	0.563
recA	Latilactobacillus sakei subsp. sakei 23K	56.125	100	0.563