Detailed information NTG0407153

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: SSU1300283_RS10185
• Genome accession: NZ_CP058741
• Coordinates: 2100329..2100736 (-)
• Length: 135 a.a.
• NCBI ID: WP_014636753.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 13-00283-02
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2095329..2105736

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSU1300283_RS10155 (SSU1300283_02061)	-	2096142..2096693 (-)	552	WP_014636756.1	folate family ECF transporter S component	-
SSU1300283_RS10160 (SSU1300283_02062)	-	2097008..2098195 (-)	1188	WP_002936543.1	acetate kinase	-
SSU1300283_RS10165 (SSU1300283_02063)	comGH	2098245..2099198 (-)	954	WP_002936545.1	class I SAM-dependent methyltransferase	Machinery gene
SSU1300283_RS10170 (SSU1300283_02064)	comGG	2099255..2099665 (-)	411	WP_002936546.1	competence type IV pilus minor pilin ComGG	-
SSU1300283_RS10175 (SSU1300283_02065)	comGF/cglF	2099643..2100077 (-)	435	WP_002936547.1	competence type IV pilus minor pilin ComGF	Machinery gene
SSU1300283_RS10180 (SSU1300283_02066)	comGE	2100064..2100357 (-)	294	WP_002936548.1	competence type IV pilus minor pilin ComGE	Machinery gene
SSU1300283_RS10185 (SSU1300283_02067)	comGD/cglD	2100329..2100736 (-)	408	WP_014636753.1	competence type IV pilus minor pilin ComGD	Machinery gene
SSU1300283_RS10190 (SSU1300283_02068)	comGC	2100717..2100998 (-)	282	WP_002936550.1	competence type IV pilus major pilin ComGC	Machinery gene
SSU1300283_RS10195 (SSU1300283_02069)	comGB	2101000..2102037 (-)	1038	WP_255195823.1	competence type IV pilus assembly protein ComGB	Machinery gene
SSU1300283_RS10200 (SSU1300283_02070)	comGA	2101949..2102899 (-)	951	WP_002936562.1	competence type IV pilus ATPase ComGA	Machinery gene
SSU1300283_RS10205 (SSU1300283_02071)	-	2102985..2103935 (+)	951	WP_014636751.1	S66 peptidase family protein	-
SSU1300283_RS10210 (SSU1300283_02072)	-	2103970..2104335 (-)	366	WP_002936568.1	DUF1033 family protein	-

Sequence

Protein

• Length: 135 a.a.
• Molecular weight: 15326.63 Da
• Isoelectric Point: 9.6573

>NTDB_id=407153 SSU1300283_RS10185 WP_014636753.1 2100329..2100736(-) (comGD/cglD) [Streptococcus suis strain 13-00283-02]
MLRRKNKAFTLFESLLTLLVVSFLAVSLSGTVQTVFRSVQEEIFLWEFEAIYKDSQKLAASFHQKVNLAIGGQEVTNGYQ
AVQVPRNIEVLEGKTITLEEDGGNSSLTKIRFRLSQKIVTYQLYIGSGRYKKTEE

Nucleotide

• Length: 408 bp

>NTDB_id=407153 SSU1300283_RS10185 WP_014636753.1 2100329..2100736(-) (comGD/cglD) [Streptococcus suis strain 13-00283-02]
ATGCTACGGCGAAAAAATAAGGCTTTTACCCTGTTTGAAAGCCTGCTGACCTTGTTGGTTGTCAGTTTTTTAGCTGTTTC
CTTATCAGGAACAGTACAAACGGTCTTTCGGTCTGTTCAGGAAGAAATTTTTCTCTGGGAATTTGAGGCCATCTATAAAG
ACAGTCAGAAATTGGCAGCTAGTTTCCACCAAAAAGTGAACCTTGCTATCGGTGGACAGGAGGTTACAAATGGTTATCAG
GCTGTACAGGTACCCAGAAATATAGAAGTGTTGGAAGGGAAGACCATTACACTTGAAGAAGATGGTGGAAATTCTTCTCT
GACCAAGATTCGTTTTCGGCTTAGTCAAAAAATAGTCACGTATCAATTATATATAGGGAGTGGTCGCTATAAGAAAACAG
AAGAATAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae Rx1	46.512	95.556	0.444
comGD/cglD	Streptococcus pneumoniae D39	46.512	95.556	0.444
comGD/cglD	Streptococcus pneumoniae R6	46.512	95.556	0.444
comGD/cglD	Streptococcus pneumoniae TIGR4	46.512	95.556	0.444
comGD	Streptococcus gordonii str. Challis substr. CH1	47.244	94.074	0.444
comGD/cglD	Streptococcus mitis NCTC 12261	45.736	95.556	0.437
comGD	Streptococcus mutans UA140	45.736	95.556	0.437
comGD	Streptococcus mutans UA159	45.736	95.556	0.437
comGD/cglD	Streptococcus mitis SK321	44.961	95.556	0.43