Detailed information NTG0407063

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: GPY00_RS07655
• Genome accession: NZ_CP046747
• Coordinates: 1638997..1640712 (+)
• Length: 571 a.a.
• NCBI ID: WP_187386856.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain 3541-04
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1633997..1645712

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY00_RS07635	pilM	1636290..1637306 (+)	1017	WP_158128539.1	type IV pilus assembly protein PilM	Machinery gene
GPY00_RS07640	pilN	1637296..1637880 (+)	585	WP_000902746.1	PilN domain-containing protein	Machinery gene
GPY00_RS07645	pilO	1637873..1638463 (+)	591	WP_000157688.1	type 4a pilus biogenesis protein PilO	Machinery gene
GPY00_RS07650	pilP	1638453..1638971 (+)	519	WP_000792032.1	pilus assembly protein PilP	Machinery gene
GPY00_RS07655	pilQ	1638997..1640712 (+)	1716	WP_187386856.1	type IV pilus secretin PilQ family protein	Machinery gene
GPY00_RS07660	aroK	1640899..1641423 (+)	525	WP_000818616.1	shikimate kinase AroK	-
GPY00_RS07665	aroB	1641451..1642536 (+)	1086	WP_044127029.1	3-dehydroquinate synthase	-
GPY00_RS07670	-	1642591..1644066 (+)	1476	WP_044127028.1	AAA family ATPase	-
GPY00_RS07675	-	1644136..1644969 (+)	834	WP_000744680.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	-

Sequence

Protein

• Length: 571 a.a.
• Molecular weight: 62374.46 Da
• Isoelectric Point: 4.5760

>NTDB_id=407063 GPY00_RS07655 WP_187386856.1 1638997..1640712(+) (pilQ) [Vibrio cholerae strain 3541-04]
MKNGLKTYVAQTWLTLWVGFALCASSMVFSAESATANQLENIDFRVNKEKAAVLIVELASPSAVVDVQKVQEGLSIELLK
TDVADDKLYLLDVKDFSTPVESVEVFRKEPSTQLVVTVDGEFQHDYTLKGKYLEVVISKLKADEKPKPKSVLEKEGKLIS
INFQDIPVRNVLQLIADYNGFNLVVSDSVVGNLTLRLDGVPWQQVLDIILQVKGLDKRVDGNVILIAPKEELDLREKQAL
EKARLAEELGDLKSEIIKINFAKASDIAAMIGGEGNVNMLSERGSISIDERTNSLLIRELPDNIAVIREIIESLDIPVKQ
VQIEARIVTVKEGNLDELGVRWGVMSTNGSHSVGGTIESNLWQQGLLADDEFPVDEFLNVNLASTSANASSIAFQVAKLG
SGTLLDLELSALQNESKAEIISSPRLITTNKQPAYIEQGTEIPYLESSSSGASTVAFKKAVLSLKVTPQITPDNRLVLDL
SVTQDRRGETVKTGTGEAVSIDTQRIGTQVLVNNGETVVLGGIFQHSINNSVDKVPLLGDLPVLGALFRRTYEQMGKSEL
LIFVTPKVVIQ

Nucleotide

• Length: 1716 bp

>NTDB_id=407063 GPY00_RS07655 WP_187386856.1 1638997..1640712(+) (pilQ) [Vibrio cholerae strain 3541-04]
ATGAAAAATGGATTGAAAACTTATGTCGCACAGACTTGGCTGACCTTGTGGGTTGGTTTTGCACTTTGTGCTTCTTCCAT
GGTGTTTAGTGCTGAATCCGCTACCGCCAACCAGTTGGAAAACATCGACTTTCGGGTCAACAAAGAGAAGGCGGCGGTCT
TAATTGTCGAATTGGCTTCGCCATCGGCGGTCGTGGATGTGCAAAAAGTCCAAGAAGGGCTGAGTATTGAGCTACTGAAA
ACCGATGTGGCGGATGACAAGCTGTATCTGCTCGATGTGAAAGATTTTTCGACCCCTGTTGAGAGCGTGGAAGTATTCCG
TAAAGAGCCAAGCACACAACTTGTTGTGACTGTTGATGGGGAGTTTCAGCACGATTATACCTTGAAAGGAAAATACCTTG
AGGTCGTGATCAGTAAACTCAAAGCCGATGAAAAGCCTAAGCCCAAGAGTGTCTTGGAAAAAGAAGGCAAGCTTATCTCA
ATTAACTTCCAAGATATTCCGGTGCGTAACGTACTGCAGCTGATTGCCGATTATAACGGTTTCAACTTAGTGGTTTCCGA
TTCGGTGGTGGGTAACCTGACTTTACGCTTGGATGGCGTGCCTTGGCAGCAAGTGTTGGACATTATTCTGCAAGTCAAAG
GGCTCGATAAGCGGGTCGATGGCAATGTGATTTTGATTGCGCCGAAAGAGGAACTCGACTTGCGCGAGAAACAAGCGCTC
GAAAAAGCCCGTTTAGCAGAAGAGTTGGGCGATTTAAAATCAGAAATCATCAAGATTAACTTTGCCAAAGCGTCTGACAT
TGCGGCGATGATCGGCGGTGAAGGCAACGTGAATATGTTGTCTGAACGAGGTTCGATCAGCATCGACGAACGAACTAACT
CGCTATTGATCCGAGAGCTGCCCGATAACATTGCCGTGATCCGCGAGATCATTGAATCGCTGGATATTCCGGTCAAACAA
GTTCAAATCGAAGCGCGGATTGTCACCGTCAAAGAAGGTAACTTGGATGAACTTGGTGTGCGTTGGGGTGTGATGTCGAC
CAATGGTAGTCACTCCGTGGGTGGAACCATTGAAAGTAACTTATGGCAGCAAGGTTTATTGGCAGATGATGAATTTCCGG
TGGATGAATTCTTAAATGTGAATTTGGCTTCCACCTCTGCCAATGCGTCTTCGATTGCTTTCCAAGTCGCTAAATTGGGC
TCAGGTACGTTGTTGGATTTGGAGCTTTCAGCATTACAAAATGAATCGAAGGCCGAAATCATCTCTAGCCCTCGCTTGAT
TACCACCAATAAACAGCCTGCCTATATTGAGCAAGGTACTGAGATCCCTTATCTGGAATCGTCTTCCAGTGGTGCCTCTA
CGGTCGCGTTTAAAAAAGCGGTATTGAGCTTGAAGGTGACACCACAAATCACCCCAGATAACCGCTTGGTGCTCGACTTG
AGTGTGACCCAAGACCGACGCGGTGAAACGGTGAAAACCGGTACGGGTGAAGCGGTTTCTATTGATACTCAGCGCATTGG
CACTCAAGTGTTGGTGAATAACGGAGAAACTGTGGTGTTGGGTGGCATTTTCCAACACAGCATCAATAATTCGGTAGATA
AGGTGCCACTGCTGGGGGACTTGCCTGTTTTGGGCGCGTTATTCAGACGAACCTATGAGCAAATGGGCAAAAGTGAACTG
CTGATTTTTGTCACGCCGAAAGTGGTCATTCAATAA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (411-569)

• Bacterial type II/III secretion system short domain (Secretin_N) (255-320)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Vibrio cholerae strain A1552	99.299	100	0.993
pilQ	Vibrio cholerae O1 biovar El Tor strain E7946	99.299	100	0.993
pilQ	Vibrio campbellii strain DS40M4	78.545	96.322	0.757
pilQ	Legionella pneumophila strain ERS1305867	42.963	94.571	0.406
pilQ	Legionella pneumophila strain Lp02	42.963	94.571	0.406
comQ	Acinetobacter baylyi ADP1	39.161	100	0.392
pilQ	Acinetobacter baumannii strain A118	37.819	100	0.389
pilQ	Acinetobacter baumannii D1279779	37.819	100	0.389
pilQ	Pseudomonas aeruginosa PAK	39.312	96.673	0.38