Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   GO995_RS01560 Genome accession   NZ_CP046624
Coordinates   272598..273860 (+) Length   420 a.a.
NCBI ID   WP_157628699.1    Uniprot ID   -
Organism   Streptococcus ruminicola strain CNU_G3     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 267598..278860
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO995_RS01535 (GO995_01535) galE 268433..269431 (+) 999 WP_027968094.1 UDP-glucose 4-epimerase GalE -
  GO995_RS01540 (GO995_01540) - 269509..270390 (+) 882 WP_157628695.1 GNAT family N-acetyltransferase -
  GO995_RS01545 (GO995_01545) yajC 270462..270806 (+) 345 WP_157628696.1 preprotein translocase subunit YajC -
  GO995_RS01550 (GO995_01550) - 270941..271696 (+) 756 WP_157628697.1 isoprenyl transferase -
  GO995_RS01555 (GO995_01555) - 271709..272503 (+) 795 WP_157628698.1 phosphatidate cytidylyltransferase -
  GO995_RS01560 (GO995_01560) eeP 272598..273860 (+) 1263 WP_157628699.1 RIP metalloprotease RseP Regulator
  GO995_RS01565 (GO995_01565) - 274012..275868 (+) 1857 WP_157628700.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 420 a.a.        Molecular weight: 45591.13 Da        Isoelectric Point: 9.4183

>NTDB_id=406148 GO995_RS01560 WP_157628699.1 272598..273860(+) (eeP) [Streptococcus ruminicola strain CNU_G3]
MLGIITFIIVFGILVIVHEFGHLYFAKKAGILVREFSIGMGPKIFSHFDKEGTAYTFRILPLGGYVRMAGWGDDTTEIKT
GTPASLSLNKDGLVTRINLSHKQLDNTALPMNVTSYDLEDKLEITGLVLDEQKTYKVHHDATIVEEDGTEIRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGTLAFISLVFMQGGVPNSSTNAVRVTDGGAMQAAGVKNGDRVLAIGDYKVTNWSDLTE
AVTKSTKNISKGDTISVKVKDKSGKVKTLAVKPVENHGSYLIGVSSALKTGFWDKITGGFQMAWQGATAILNALKGLVSN
FSLNKLGGPVAMYQASSQAASYGLTSVINLLAVLSINLGIVNLIPIPALDGGKILMNLIEIVRRKPLKQETETYITLVGV
VIMIILMIAVTWNDIMRVFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=406148 GO995_RS01560 WP_157628699.1 272598..273860(+) (eeP) [Streptococcus ruminicola strain CNU_G3]
ATGCTCGGAATTATAACGTTTATTATTGTTTTTGGAATCTTAGTTATTGTCCACGAATTTGGTCACCTATATTTTGCTAA
AAAAGCAGGTATCTTGGTGAGAGAATTTTCTATCGGGATGGGCCCGAAAATCTTTTCTCATTTTGATAAGGAAGGGACAG
CTTATACCTTTCGTATCTTACCTTTAGGTGGATATGTCCGTATGGCAGGCTGGGGTGATGATACCACTGAAATCAAGACA
GGTACACCAGCTAGCTTGAGTTTGAACAAAGACGGACTTGTGACACGTATTAATCTATCACATAAACAGTTGGATAATAC
AGCTCTTCCTATGAATGTGACTTCTTATGATTTGGAAGATAAATTAGAAATCACAGGATTGGTTTTAGATGAGCAAAAGA
CATATAAAGTTCATCACGATGCCACAATCGTTGAAGAAGATGGCACAGAGATTCGCATTGCGCCCCTTGATGTGCAGTAT
CAAAATGCTACTGTCTGGGGACGTTTGATGACAAACTTTGCTGGTCCGATGAATAATTTTATTCTAGGAACGCTAGCTTT
CATCTCACTTGTCTTTATGCAAGGCGGAGTCCCGAATTCCTCGACAAATGCTGTGCGAGTGACTGACGGTGGTGCCATGC
AAGCTGCAGGCGTCAAAAATGGTGATAGAGTTTTAGCTATCGGTGATTATAAAGTCACAAACTGGTCTGATTTGACTGAA
GCTGTAACTAAGTCGACTAAGAATATCTCAAAAGGCGACACTATCTCAGTCAAAGTCAAAGACAAATCAGGAAAGGTTAA
AACACTTGCTGTAAAACCAGTTGAAAATCACGGAAGTTACCTTATTGGTGTTTCTTCAGCTTTGAAAACAGGCTTCTGGG
ATAAAATCACTGGCGGTTTCCAAATGGCATGGCAAGGTGCTACAGCCATTCTCAATGCACTAAAAGGTCTTGTGTCAAAC
TTTAGTTTGAACAAGCTAGGTGGTCCTGTTGCCATGTACCAAGCCTCAAGTCAAGCAGCTTCTTACGGATTGACATCGGT
GATTAATTTGCTTGCTGTTTTGTCAATCAACCTTGGAATTGTGAACTTAATTCCAATTCCGGCTTTGGATGGCGGAAAAA
TCTTAATGAATTTGATTGAGATTGTTCGCCGCAAACCATTGAAACAAGAAACTGAAACCTATATCACTCTGGTCGGTGTC
GTCATTATGATTATTTTAATGATTGCTGTGACATGGAATGATATCATGCGCGTCTTTTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-406)

PDZ domain (PDZ_2)

(204-272)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

69.048

100

0.69
  eeP Streptococcus thermophilus LMG 18311

68.81

100

0.688

Multiple sequence alignment