Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   GOY09_RS07370 Genome accession   NZ_CP046590
Coordinates   1423826..1424779 (+) Length   317 a.a.
NCBI ID   WP_164942889.1    Uniprot ID   A0A6G7ETT4
Organism   Macrococcoides canis strain LI021     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1418826..1429779
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOY09_RS07345 (GOY09_07325) - 1419176..1419835 (+) 660 WP_164953954.1 uracil-DNA glycosylase -
  GOY09_RS07350 (GOY09_07330) - 1419832..1420140 (+) 309 WP_086043482.1 DUF5327 family protein -
  GOY09_RS07355 (GOY09_07335) - 1420160..1420522 (+) 363 WP_133420095.1 DUF423 domain-containing protein -
  GOY09_RS07360 (GOY09_07340) - 1420657..1422114 (+) 1458 WP_211552460.1 APC family permease -
  GOY09_RS07365 (GOY09_07345) - 1422294..1423646 (-) 1353 WP_133420094.1 APC family permease -
  GOY09_RS07370 (GOY09_07350) ceuB 1423826..1424779 (+) 954 WP_164942889.1 ABC transporter permease Machinery gene
  GOY09_RS07375 (GOY09_07355) - 1424772..1425725 (+) 954 WP_164942888.1 iron chelate uptake ABC transporter family permease subunit -
  GOY09_RS07380 (GOY09_07360) - 1425718..1426524 (+) 807 WP_138072666.1 ABC transporter ATP-binding protein -
  GOY09_RS07385 (GOY09_07365) - 1426617..1427657 (+) 1041 WP_138072664.1 ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD -
  GOY09_RS07390 (GOY09_07370) hemQ 1427694..1428443 (-) 750 WP_211552461.1 hydrogen peroxide-dependent heme synthase -
  GOY09_RS07395 (GOY09_07375) pta 1428595..1429584 (+) 990 WP_211552462.1 phosphate acetyltransferase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34753.43 Da        Isoelectric Point: 10.5554

>NTDB_id=405743 GOY09_RS07370 WP_164942889.1 1423826..1424779(+) (ceuB) [Macrococcoides canis strain LI021]
MKIIYTILLLLILSIISMFIGVVDLSPSNLLNLDENQKNILLNSRLPRTFAIILAGVALSVAGLLMQQLTRNKFVSPTTA
GTMDFAKFGVLIAMIFFAQAPLLIKLSFSIVSAIIGTMMFMWIVNRIKFKDAIFIPLVGLMLGNIVSSLATFMALRFNAV
QSISNFFVGDFSMITKGRYEVLFIIIPMVIVIYLFAHHFTIVGMGESFSKNLGISYAKIMNLGVIIAAIVSATVVVTIGV
LPFLGLIIPNIVGLFVGDHMNKALPYTALFGAILVMVADIFSRLIIFPYEIPIGLTLGIVGSVIFMAILLKRRKSYV

Nucleotide


Download         Length: 954 bp        

>NTDB_id=405743 GOY09_RS07370 WP_164942889.1 1423826..1424779(+) (ceuB) [Macrococcoides canis strain LI021]
ATGAAAATAATTTACACCATACTACTGTTGCTGATTTTGTCTATAATCTCTATGTTTATTGGTGTTGTAGATTTAAGTCC
ATCAAATTTACTTAATTTAGATGAGAATCAAAAGAATATTTTGTTGAACAGTCGACTGCCGAGGACGTTTGCTATTATAT
TAGCTGGTGTGGCATTAAGTGTAGCTGGTTTGTTAATGCAGCAGCTCACACGTAATAAATTTGTATCACCAACGACAGCG
GGTACGATGGATTTTGCGAAGTTTGGTGTATTGATTGCAATGATATTCTTTGCACAGGCTCCATTACTTATTAAATTATC
GTTCAGTATTGTTTCAGCGATTATCGGTACGATGATGTTTATGTGGATTGTCAATCGCATTAAGTTTAAGGATGCAATCT
TTATTCCGCTTGTAGGGCTCATGCTCGGTAACATCGTTTCAAGTTTAGCGACGTTTATGGCACTGCGTTTTAATGCGGTG
CAAAGTATTTCTAACTTCTTTGTGGGAGATTTCTCGATGATAACGAAAGGGCGTTATGAAGTATTATTCATTATCATTCC
GATGGTTATCGTGATTTATCTCTTTGCACATCATTTTACAATCGTCGGAATGGGTGAATCTTTCAGTAAGAACTTAGGTA
TATCTTACGCAAAGATAATGAATCTCGGTGTTATTATTGCAGCAATTGTATCTGCAACAGTAGTGGTAACGATTGGGGTA
TTACCATTTTTAGGATTAATTATTCCGAATATTGTTGGATTGTTTGTCGGTGATCATATGAATAAAGCATTACCATACAC
AGCATTATTTGGTGCGATTCTCGTCATGGTAGCAGATATTTTCAGTCGATTGATCATCTTCCCTTACGAGATTCCAATCG
GTCTCACGCTTGGTATCGTTGGAAGTGTTATCTTTATGGCAATTCTCCTGAAGAGGAGGAAGTCATATGTCTAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G7ETT4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

49.837

96.845

0.483

Multiple sequence alignment