Detailed information NTG0404320

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HWU15_RS07450
• Genome accession: NZ_CP058281
• Coordinates: 1559945..1561378 (-)
• Length: 477 a.a.
• NCBI ID: WP_237015431.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hk711
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1554945..1566378

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HWU15_RS07425	recG	1556085..1557950 (-)	1866	WP_237015428.1	ATP-dependent DNA helicase RecG	-
HWU15_RS07430	-	1558032..1558379 (+)	348	WP_237015429.1	hypothetical protein	-
HWU15_RS07435	-	1558383..1559018 (+)	636	WP_000668020.1	outer membrane protein	-
HWU15_RS07440	-	1559015..1559767 (-)	753	WP_237015430.1	exodeoxyribonuclease III	-
HWU15_RS07450	comH	1559945..1561378 (-)	1434	WP_237015431.1	competence protein	Machinery gene
HWU15_RS07455	dnaA	1561599..1562966 (-)	1368	WP_237015432.1	chromosomal replication initiator protein DnaA	-
HWU15_RS07460	-	1563120..1563656 (+)	537	WP_000922947.1	purine-nucleoside phosphorylase	-
HWU15_RS07465	-	1563703..1563942 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HWU15_RS07470	glmS	1563943..1565736 (+)	1794	WP_237015433.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 54769.83 Da
• Isoelectric Point: 7.0433

>NTDB_id=404320 HWU15_RS07450 WP_237015431.1 1559945..1561378(-) (comH) [Helicobacter pylori strain Hk711]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEPHPQQMPSLNAPIQKPQNKPTPSQQSLQNFSYPESKLGSKNPKNSLLQPL
ATPNKTSSANEIKTPTNDTKPPLKHSLEDQENNLFVAPPTEKTLPNNNADINEHHESHENRDSVEKQAIRDPNIKEFACG
KWVYDDENLQAYRPSILKRIDEDKRTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQARSS
TEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEVTRDELNL
NEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSKVVCVKKGNYLFNEV

Nucleotide

• Length: 1434 bp

>NTDB_id=404320 HWU15_RS07450 WP_237015431.1 1559945..1561378(-) (comH) [Helicobacter pylori strain Hk711]
ATGAAAAAAACCCTTTGTTTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTGCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACATAAAAAACTCACGCTCACAATCACTCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAACCGCACCCGCAACAAATGCCTTCCTTAAACGCGCCCATACAAAAACCACAAAACAAGCCCACTCCATCGC
AACAATCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCCTAATAAAACAAGCTCCGCTAATGAAATTAAAACACCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTT
AGAAGATCAAGAAAACAACCTCTTTGTAGCGCCACCCACTGAAAAAACTCTCCCTAACAATAACGCTGATATTAATGAAC
ACCATGAAAGCCATGAAAATAGGGATAGTGTGGAAAAACAAGCCATTAGAGATCCTAATATCAAAGAATTTGCATGCGGG
AAGTGGGTCTATGATGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCATTGATGAAGACAAACGGACTGC
AACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACCAAAATCTCTG
TCCATAAAACAGAGCCTTTAGAAGAGCCGCAAACCTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGAAGCTCT
ACAGAAAAATGCAAAAGGGCCAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTCATAGAAGAGCCTTTAAAACA
AGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATCAGATAG
AGCCGACTTTCTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAGTAACGCGCGATGAATTGAATTTG
AATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGAATACAA
AGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAGCCACGAGCCAAAA
GCACGCCTTTGAGTATTGAAAACTCTAAAGTTGTTTGTGTCAAAAAAGGGAATTATTTATTCAATGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.023	100	0.914