Detailed information NTG0401622

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: GKO36_RS07135
• Genome accession: NZ_CP046145
• Coordinates: 1382847..1383131 (+)
• Length: 94 a.a.
• NCBI ID: WP_014417633.1
• Uniprot ID: I2C4H1
• Organism: Bacillus velezensis strain PEBA20
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 1377847..1388131

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GKO36_RS07115 (GKO36_07115)	-	1379091..1379999 (+)	909	WP_014417631.1	ketopantoate reductase family protein	-
GKO36_RS07120 (GKO36_07120)	-	1380030..1381262 (-)	1233	WP_007409644.1	aminopeptidase	-
GKO36_RS07125 (GKO36_07125)	-	1381363..1381497 (-)	135	WP_003154559.1	protein YkpC	-
GKO36_RS07130 (GKO36_07130)	mreBH	1381569..1382576 (-)	1008	WP_014417632.1	cell shape-determining protein MreBH	-
GKO36_RS07135 (GKO36_07135)	abrB	1382847..1383131 (+)	285	WP_014417633.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
GKO36_RS07140 (GKO36_07140)	-	1383304..1384608 (+)	1305	WP_014417634.1	ATP-binding protein	-
GKO36_RS07145 (GKO36_07145)	-	1384610..1385437 (+)	828	WP_014417635.1	gamma-glutamylcyclotransferase family protein	-
GKO36_RS07150 (GKO36_07150)	ktrC	1385478..1386143 (+)	666	WP_003154554.1	Ktr system potassium transporter KtrC	-
GKO36_RS07155 (GKO36_07155)	ade	1386292..1388025 (+)	1734	WP_014417636.1	adenine deaminase	-

Sequence

Protein

• Length: 94 a.a.
• Molecular weight: 10516.38 Da
• Isoelectric Point: 5.8979

>NTDB_id=401622 GKO36_RS07135 WP_014417633.1 1382847..1383131(+) (abrB) [Bacillus velezensis strain PEBA20]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIVLKKYKPHGICLMTGEITSENQEYGNGKIILSPEGAK
MLLEEIEEALKGRS

Nucleotide

• Length: 285 bp

>NTDB_id=401622 GKO36_RS07135 WP_014417633.1 1382847..1383131(+) (abrB) [Bacillus velezensis strain PEBA20]
ATGAAATCAATTGGTGTAGTAAGAAAAGTAGACGAACTCGGGCGTATTGTCATGCCGATTGAATTGAGAAGAGCATTGGA
TATCGCTATTAAAGATAGTATTGAATTTTTCGTTGACGGAGACAAAATTGTCTTAAAAAAATACAAGCCGCACGGCATTT
GCTTAATGACGGGGGAAATTACCTCCGAAAATCAGGAGTACGGCAACGGCAAAATTATTTTAAGTCCTGAAGGAGCGAAA
ATGCTGCTTGAGGAAATCGAGGAAGCGTTAAAAGGTAGATCATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (54-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: I2C4H1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	55.435	97.872	0.543