Detailed information NTG0398723

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: GII23_RS16720
• Genome accession: NZ_CP045858
• Coordinates: 3543854..3546109 (-)
• Length: 751 a.a.
• NCBI ID: WP_165564186.1
• Uniprot ID: -
• Organism: Stutzerimonas balearica strain EC28
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3538854..3551109

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII23_RS16685 (GII23_16625)	murB	3539291..3540310 (-)	1020	WP_165563666.1	UDP-N-acetylmuramate dehydrogenase	-
GII23_RS16690 (GII23_16630)	-	3540307..3540771 (-)	465	WP_043219384.1	low molecular weight protein-tyrosine-phosphatase	-
GII23_RS16695 (GII23_16635)	kdsB	3540768..3541538 (-)	771	WP_165563667.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
GII23_RS16700 (GII23_16640)	-	3541535..3541720 (-)	186	WP_041106106.1	Trm112 family protein	-
GII23_RS16705 (GII23_16645)	lpxK	3541767..3542768 (-)	1002	WP_165563668.1	tetraacyldisaccharide 4'-kinase	-
GII23_RS16710 (GII23_16650)	-	3542768..3543196 (-)	429	WP_041106110.1	biopolymer transporter ExbD	-
GII23_RS16715 (GII23_16655)	-	3543193..3543825 (-)	633	WP_041106112.1	MotA/TolQ/ExbB proton channel family protein	-
GII23_RS16720 (GII23_16660)	comA	3543854..3546109 (-)	2256	WP_165564186.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
GII23_RS16725 (GII23_16665)	-	3546272..3546787 (+)	516	WP_061338483.1	DUF2062 domain-containing protein	-
GII23_RS16730 (GII23_16670)	-	3546791..3548035 (-)	1245	WP_165563669.1	lipoprotein-releasing ABC transporter permease subunit	-
GII23_RS16735 (GII23_16675)	lolD	3548035..3548745 (-)	711	WP_061340956.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
GII23_RS16740 (GII23_16680)	-	3548738..3549985 (-)	1248	WP_165563671.1	lipoprotein-releasing ABC transporter permease subunit	-
GII23_RS16745 (GII23_16685)	-	3550080..3550652 (+)	573	WP_041106120.1	PilZ domain-containing protein	-
GII23_RS16750 (GII23_16690)	-	3550657..3550962 (+)	306	WP_165563672.1	phosphodiesterase	-

Sequence

Protein

• Length: 751 a.a.
• Molecular weight: 81365.03 Da
• Isoelectric Point: 9.2836

>NTDB_id=398723 GII23_RS16720 WP_165564186.1 3543854..3546109(-) (comA) [Stutzerimonas balearica strain EC28]
MAALAVGLLVPCWLPELPAGALLALLGATAVGAMCWKRTRPFACFALGLVWACWQAQLALDDRLPVDLDGRTFWLEGVIV
GLPATIDGVVRFELTDIQSRHAGLPSRLRLGWHGGPALRAGERWRLAARLKRPRAMVNPQTFDYEAWLLSRHIGATGTVK
AGERVAASVTTVGWRDALRQRLAALDAHGRSGAIAALVVGDDSGLTPGDWQILQDTGTVHLLVISGQHVAMLAGLLYGLV
HLLYRLGCWPSRLPWLPVACGLAFGGALGYAWLAGFEVPVQRACVMVAAVLLWRLRYRHLGVWFPLLLALVLVLLANPLV
SLQPGFWLSFAAVALLVWVFAGRLGAAGWWRTLLRAQWAMTLGLLPMMLMLGLPVSFSGPLANLVAVPWVSLTVPFALVG
TAALYLPLGLGESLLNGVGWSLQGLFSLLAWVAGWQPAWLAPQASGWMLLAASLGALILLLPAGIPFRLFGGLLMLPLLF
VGSERPPPGRAEIHVLDVGQGLSVLVRTQSHDLLYDAGPRYGRFDIGERVVVPSLRRLGTRQLDLLLLSHADSDHAGGAQ
AVLRSLPVRRMLSGEAQALDLPAVEDCRPGERWRWDEVRFETWRWLRAGDGNQASCVLAVEAAGERILLTGDLDSAAEQA
LLGSRFNPRSDWLLLGHHGSRTSTSVAFLSAVAPSAALVSRSAHNPFGHPHSEVLHRLDEAGIPLYDTARDGALRIVLGS
FTAPQGLRWERRFWRENENGSRRLAAGPVLE

Nucleotide

• Length: 2256 bp

>NTDB_id=398723 GII23_RS16720 WP_165564186.1 3543854..3546109(-) (comA) [Stutzerimonas balearica strain EC28]
ATGGCCGCGCTGGCGGTGGGTTTGCTGGTGCCGTGCTGGCTGCCCGAGTTGCCGGCAGGCGCTCTGTTGGCACTGCTGGG
TGCAACGGCGGTTGGCGCGATGTGCTGGAAGCGCACGCGCCCCTTTGCGTGTTTCGCCTTGGGCCTGGTATGGGCCTGTT
GGCAGGCGCAGCTCGCCCTCGATGACCGACTCCCGGTCGATCTGGATGGCCGCACCTTCTGGCTCGAGGGCGTGATCGTC
GGCTTGCCTGCAACCATCGACGGGGTGGTTCGCTTCGAACTGACCGACATCCAGTCGCGCCATGCCGGCCTGCCGTCGCG
CCTTCGCCTTGGTTGGCACGGCGGGCCTGCGCTTCGGGCCGGTGAGCGCTGGCGACTCGCGGCACGTCTGAAACGGCCTC
GCGCAATGGTCAATCCACAGACCTTCGACTATGAGGCCTGGCTGCTCTCAAGGCACATCGGCGCGACAGGTACGGTAAAG
GCGGGCGAGCGAGTCGCGGCCTCCGTCACGACCGTCGGCTGGCGCGATGCGCTCAGGCAGCGGCTGGCTGCGCTCGATGC
CCATGGTCGCTCGGGTGCGATTGCGGCGCTGGTCGTCGGCGACGACTCCGGGCTCACGCCCGGCGATTGGCAGATCCTGC
AGGACACCGGCACGGTGCACTTACTGGTAATTTCCGGTCAGCATGTGGCGATGCTGGCCGGACTGCTCTATGGGCTGGTC
CATTTGCTCTACCGTCTGGGCTGCTGGCCTTCGCGCCTGCCGTGGCTGCCGGTTGCATGCGGTCTCGCTTTCGGCGGCGC
CCTGGGCTATGCCTGGCTGGCGGGGTTCGAGGTGCCGGTACAGCGCGCCTGTGTAATGGTTGCGGCAGTGCTGCTTTGGC
GGCTGCGCTACCGGCATCTCGGCGTCTGGTTCCCCTTGCTGCTCGCCTTGGTCCTGGTGCTGCTGGCCAACCCGCTGGTC
AGCCTGCAGCCGGGGTTCTGGCTGTCGTTCGCTGCAGTCGCGTTGCTGGTGTGGGTCTTTGCCGGCCGGCTCGGGGCTGC
CGGCTGGTGGCGCACGCTCTTGCGTGCGCAGTGGGCAATGACGCTCGGCCTGCTACCGATGATGTTGATGCTCGGGCTTC
CGGTCAGCTTCAGCGGGCCGCTTGCCAACCTCGTAGCGGTACCCTGGGTCAGCCTAACCGTTCCGTTTGCCCTCGTGGGA
ACTGCCGCGCTTTATCTACCGCTGGGGCTCGGGGAGAGCCTGCTGAATGGGGTAGGTTGGTCATTGCAGGGCTTGTTCAG
CTTGCTGGCCTGGGTCGCTGGCTGGCAGCCGGCCTGGCTCGCGCCGCAAGCCTCTGGCTGGATGCTGCTGGCCGCGAGCC
TTGGGGCGCTGATTCTGCTGCTGCCGGCAGGCATTCCGTTCCGTCTTTTCGGCGGTCTCCTGATGCTGCCCTTGCTTTTC
GTCGGCAGCGAACGCCCACCTCCGGGACGTGCCGAGATCCATGTACTGGATGTCGGTCAAGGGCTGTCAGTCCTGGTCCG
CACGCAGAGCCACGATCTGCTCTACGATGCCGGCCCCCGTTATGGTCGCTTCGATATCGGCGAGCGCGTGGTGGTGCCTT
CGTTACGTCGACTGGGGACCCGACAGCTTGATCTTTTGCTGCTCAGCCACGCCGACAGTGACCATGCTGGGGGCGCCCAG
GCGGTACTTCGATCTTTGCCGGTGCGCCGGATGCTAAGCGGTGAGGCGCAGGCATTGGACCTTCCGGCTGTAGAGGACTG
CCGGCCCGGCGAACGCTGGCGCTGGGATGAGGTGCGCTTCGAGACATGGCGCTGGCTGCGTGCAGGCGACGGAAACCAGG
CGTCCTGCGTGCTGGCGGTCGAGGCCGCTGGCGAACGGATTCTGCTGACGGGCGATCTGGACAGCGCCGCCGAGCAGGCC
CTGCTCGGCAGCCGCTTTAACCCTCGAAGCGACTGGTTGCTGCTTGGACATCATGGCAGCCGCACTTCGACTTCTGTCGC
CTTTCTCTCGGCCGTTGCGCCAAGCGCGGCGTTGGTGTCGCGTAGCGCACACAACCCGTTCGGGCACCCGCACTCCGAGG
TGCTGCATCGTTTGGATGAGGCGGGCATACCGCTCTACGACACGGCTCGGGACGGCGCCTTGCGCATAGTACTGGGCAGC
TTCACTGCGCCCCAGGGTTTACGCTGGGAGCGTCGGTTCTGGCGGGAAAATGAGAACGGCAGCCGTCGGCTGGCGGCAGG
CCCTGTGCTAGAGTGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (19-164)

• Competence protein (Competence) (197-461)

• Metallo-beta-lactamase superfamily (Lactamase_B) (497-681)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.761	93.742	0.626
comA	Ralstonia pseudosolanacearum GMI1000	36.863	100	0.376