Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   HRE60_RS04420 Genome accession   NZ_CP054153
Coordinates   906995..907477 (+) Length   160 a.a.
NCBI ID   WP_002885066.1    Uniprot ID   -
Organism   Streptococcus salivarius strain DB-B5     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 901995..912477
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HRE60_RS04400 (HRE60_04400) queG 902868..903986 (+) 1119 WP_084914603.1 tRNA epoxyqueuosine(34) reductase QueG -
  HRE60_RS04405 (HRE60_04405) prfB 904039..905137 (+) 1099 WP_096833329.1 peptide chain release factor 2 -
  HRE60_RS04410 (HRE60_04410) ftsE 905225..905917 (+) 693 WP_002885005.1 cell division ATP-binding protein FtsE -
  HRE60_RS04415 (HRE60_04415) ftsX 905910..906839 (+) 930 WP_003092823.1 permease-like cell division protein FtsX -
  HRE60_RS04420 (HRE60_04420) mutX 906995..907477 (+) 483 WP_002885066.1 8-oxo-dGTP diphosphatase Machinery gene
  HRE60_RS04425 (HRE60_04425) - 907487..908665 (+) 1179 WP_004182599.1 AI-2E family transporter -
  HRE60_RS04430 (HRE60_04430) - 908655..909884 (+) 1230 WP_181671221.1 tetratricopeptide repeat protein -
  HRE60_RS04435 (HRE60_04435) lepB 910006..910563 (+) 558 WP_002884860.1 signal peptidase I -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18793.15 Da        Isoelectric Point: 4.4433

>NTDB_id=397522 HRE60_RS04420 WP_002885066.1 906995..907477(+) (mutX) [Streptococcus salivarius strain DB-B5]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREILEETHFTVTEMDFKGMITFPEFTPGH
DWYTYVFKVTGFEGELISDEESREGTLEWVPYDEVLSKPTWEGDYEIFKWILEDKPFFSAKFVYDRNQNLVDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=397522 HRE60_RS04420 WP_002885066.1 906995..907477(+) (mutX) [Streptococcus salivarius strain DB-B5]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGAAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTTGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTCTCGAGGAAACCCATTTTACAGTGACTGAGATGGATTTTAAAGGGATGATTACCTTTCCAGAATTTACCCCCGGTCAT
GATTGGTATACCTATGTCTTTAAGGTAACTGGTTTTGAAGGAGAACTCATCTCAGATGAGGAGTCTCGTGAAGGAACGCT
TGAATGGGTACCTTATGATGAGGTCTTATCTAAACCAACTTGGGAAGGTGACTACGAGATCTTCAAGTGGATTCTTGAAG
ATAAGCCTTTCTTCTCTGCAAAATTTGTCTATGATCGTAACCAAAACTTAGTAGACAAGACTGTAACCTTTTATGATAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

72.956

99.375

0.725

Multiple sequence alignment