Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   FOC73_RS09095 Genome accession   NZ_CP053998
Coordinates   1866390..1867046 (-) Length   218 a.a.
NCBI ID   WP_002884016.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_771     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1861390..1872046
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC73_RS09080 (FOC73_09080) holA 1863128..1864162 (+) 1035 WP_002884017.1 DNA polymerase III subunit delta -
  FOC73_RS09085 (FOC73_09085) sodA 1864258..1864863 (+) 606 WP_002884006.1 superoxide dismutase SodA -
  FOC73_RS09090 (FOC73_09090) - 1864961..1866358 (+) 1398 WP_002884094.1 serine hydrolase -
  FOC73_RS09095 (FOC73_09095) cclA/cilC 1866390..1867046 (-) 657 WP_002884016.1 A24 family peptidase Machinery gene
  FOC73_RS09100 (FOC73_09100) - 1867156..1867677 (+) 522 WP_002884114.1 Dps family protein -
  FOC73_RS09105 (FOC73_09105) - 1867765..1868202 (+) 438 WP_002884117.1 Fur family transcriptional regulator -
  FOC73_RS09110 (FOC73_09110) - 1868305..1868511 (+) 207 WP_014634249.1 YqgQ family protein -
  FOC73_RS09115 (FOC73_09115) - 1868504..1869472 (+) 969 WP_002884020.1 ROK family glucokinase -
  FOC73_RS09120 (FOC73_09120) typA 1869617..1871467 (+) 1851 WP_002884130.1 translational GTPase TypA -
  FOC73_RS09125 (FOC73_09125) - 1871487..1871756 (+) 270 WP_002884134.1 DUF3165 family protein -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25249.60 Da        Isoelectric Point: 8.1099

>NTDB_id=396956 FOC73_RS09095 WP_002884016.1 1866390..1867046(-) (cclA/cilC) [Streptococcus salivarius strain FDAARGOS_771]
MLSIIYFFLGASLGSFIGLICDRFPERSIIFPRSHCSHCKHQLRFFEMIPILSQLFLRSRCRSCQTPIPFRYLFMELFCG
GICLLYFYDFLSLEVTYFLYFSLCLSIFDLKHKSYPLLIWIVGTVPLLFMGNYYLSFALGIILAILSYMKHLNIGEGDFL
YLASASLIFPFSKILLIIEIACLLGLAYFLLQRNLKECIAFVPFLFLGILLLTFCSII

Nucleotide


Download         Length: 657 bp        

>NTDB_id=396956 FOC73_RS09095 WP_002884016.1 1866390..1867046(-) (cclA/cilC) [Streptococcus salivarius strain FDAARGOS_771]
ATGTTAAGTATTATTTATTTTTTTCTAGGAGCCTCTTTAGGTTCATTTATCGGACTAATTTGTGATCGTTTTCCTGAGAG
GTCGATTATTTTCCCTAGAAGTCACTGTAGCCATTGCAAGCATCAGCTGCGTTTTTTCGAGATGATACCTATCCTCTCAC
AACTTTTCTTAAGATCTCGATGCCGTTCATGTCAGACTCCTATCCCTTTTCGTTACCTCTTTATGGAACTATTTTGTGGG
GGAATATGCCTGCTATATTTCTATGACTTTTTGAGTCTTGAAGTAACCTACTTTCTTTACTTCAGCCTTTGTCTATCAAT
TTTTGATTTGAAACATAAATCCTATCCGCTTCTGATTTGGATAGTTGGAACAGTCCCACTCTTATTCATGGGCAACTACT
ACCTCTCATTTGCCTTGGGGATAATCCTCGCCATCCTTTCTTATATGAAACATCTAAATATTGGGGAAGGAGATTTTCTC
TACTTAGCAAGTGCCTCACTAATTTTCCCATTTTCAAAAATACTACTTATTATCGAAATTGCCTGCCTATTAGGACTAGC
TTACTTCCTTCTACAAAGAAATCTCAAGGAATGCATCGCATTTGTCCCATTTCTTTTTCTAGGGATATTACTTCTTACTT
TTTGTTCAATTATATAG

Domains

Predicted by InterProScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-90)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

40.826

100

0.408
  cclA/cilC Streptococcus pneumoniae TIGR4

41.589

98.165

0.408
  cclA/cilC Streptococcus mitis NCTC 12261

40.654

98.165

0.399
  cclA/cilC Streptococcus pneumoniae Rx1

40.654

98.165

0.399
  cclA/cilC Streptococcus pneumoniae D39

40.654

98.165

0.399
  cclA/cilC Streptococcus pneumoniae R6

40.654

98.165

0.399